RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ASCL3Q9NQ33 180 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 MIEF1Q9NQG6 463 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 C19orf12Q9NSK7 152 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 MAN2C1Q9NTJ4 1040 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 IL17BQ9UHF5 180 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 KIAA0100Q14667 2235 aaKnown RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SLC2A10O95528 541 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 IFNA17P01571 189 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SOD3P08294 240 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 QDPRP09417 244 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 CTSHP09668 335 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 THEGLP0DJG4 465 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 PAX1P15863 534 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 XPAP23025 273 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 RPS10P46783 165 aaKnown RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 MECP2P51608 486 aaKnown RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 CBFBQ13951 182 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 ACSM3Q53FZ2 586 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 ZNF385BQ569K4 471 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 ATPAF1Q5TC12 328 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 STPG1Q5TH74 334 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 CDC73Q6P1J9 531 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 C19orf47Q8N9M1 422 aaKnown RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 OR4E2Q8NGC2 313 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SMPDL3BQ92485 455 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SNHG12Q9BXW3 62 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 PRDM7Q9NQW5 492 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 LANCL2Q9NS86 450 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 OARD1Q9Y530 152 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 MCIDASD6RGH6 385 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 FGF10O15520 208 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 DLEU1O43261 78 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 PRAMEF4O60810 478 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 GPR32O75388 356 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 VNN2O95498 520 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 FABP4P15090 132 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 TAF6P49848 677 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 ZNF84P51523 738 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 P2RX1P51575 399 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 ATP1B3P54709 279 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 PRAMEF9Q5VWM5 478 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 DMRTA1Q5VZB9 504 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 NDUFAF7Q7L592 441 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 GPR137CQ8N3F9 429 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 CLDN19Q8N6F1 224 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 NAXEQ8NCW5 288 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SEMA6DQ8NFY4 1073 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 OR5AP2Q8NGF4 316 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 OR56B1Q8NGI3 324 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SECTM1Q8WVN6 248 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 APOBEC4Q8WW27 367 aaKnown RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 TMEM40Q8WWA1 233 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 TIMP4Q99727 224 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SULT4A1Q9BR01 284 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 NDUFAF3Q9BU61 184 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 SELENOIQ9C0D9 397 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 FBXL4Q9UKA2 621 aa9.81□□□□□ -0.84
CAPN3-203ENST00000349748 TIMM13Q9Y5L4 95 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-203ENST00000349748 CKAP5Q14008 2032 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 RRP8O43159 456 aaKnown RBP9.8□□□□□ -0.84
CAPN3-203ENST00000349748 FGBP02675 491 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 CD74P04233 296 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 GALP22466 123 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 CEACAM6P40199 344 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 TTPAP49638 278 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 PCBP3P57721 371 aaKnown RBP9.8□□□□□ -0.84
CAPN3-203ENST00000349748 SLC26A5P58743 744 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 ZXDCQ2QGD7 858 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-203ENST00000349748 TMEM31Q5JXX7 168 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 C11orf87Q6NUJ2 197 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 ARHGAP11AQ6P4F7 1023 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 ACOT7LQ6ZUV0 252 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 TAF8Q7Z7C8 310 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 BPIFB2Q8N4F0 458 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 TMEM99Q8N816 258 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 CPEB3Q8NE35 698 aaKnown RBP9.8□□□□□ -0.84
CAPN3-203ENST00000349748 RNF141Q8WVD5 230 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 CASD1Q96PB1 797 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 ADGRE3Q9BY15 652 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 OR51B6Q9H340 312 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 EPHX3Q9H6B9 360 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 TMEM100Q9NV29 134 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 ANKRD36A6QL64 1941 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 LOC100509620A0A075B734 347 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 MKRN2OSH3BPM6 223 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 ASGR2P07307 311 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 ID4P47928 161 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 PTH2RP49190 550 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 CAV2P51636 162 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 MRPS11P82912 194 aaKnown RBP9.8□□□□□ -0.84
CAPN3-203ENST00000349748 ZNF345Q14585 488 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 MAPK14Q16539 360 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 LANCL3Q6ZV70 420 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 NRROSQ86YC3 692 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 STEAP2Q8NFT2 490 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 OR52N2Q8NGI0 321 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 XAGE5Q8WWM1 108 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 SLC25A36Q96CQ1 311 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 DEFB118Q96PH6 123 aa9.8□□□□□ -0.84
CAPN3-203ENST00000349748 DDA1Q9BW61 102 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms