RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 OR52I1Q8NGK6 324 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 POC1BQ8TC44 478 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 THAP4Q8WY91 577 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 LGALS12Q96DT0 336 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 NPAS1Q99742 590 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 POTEKPQ9BYX7 375 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 FGF20Q9NP95 211 aaPredicted RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 TIMMDC1Q9NPL8 285 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 DIMT1Q9UNQ2 313 aaKnown RBP16.88■□□□□ 0.29
PTN-201ENST00000348225 CORINQ9Y5Q5 1042 aa16.88■□□□□ 0.29
PTN-201ENST00000348225 DMXL1Q9Y485 3027 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 SLC22A31A6NKX4 558 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 ADORA3P0DMS8 318 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 HIST1H1CP16403 213 aaKnown RBP16.87■□□□□ 0.29
PTN-201ENST00000348225 DCKP27707 260 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 IDUAP35475 653 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 CTXN1P60606 82 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 ERVK-25P63136 954 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.87■□□□□ 0.29
PTN-201ENST00000348225 SELENBP1Q13228 472 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 CNPY1Q3B7I2 92 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 EMC4Q5J8M3 183 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 GPR107Q5VW38 600 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 MEPCEQ7L2J0 689 aaKnown RBP16.87■□□□□ 0.29
PTN-201ENST00000348225 ZNF367Q7RTV3 350 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 LRRC75AQ8NAA5 344 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 SLC37A3Q8NCC5 494 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 PSD4Q8NDX1 1056 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 BBS1Q8NFJ9 593 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 MFSD8Q8NHS3 518 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 SLC25A43Q8WUT9 341 aaPredicted RBP16.87■□□□□ 0.29
PTN-201ENST00000348225 JSRP1Q96MG2 331 aaPredicted RBP16.87■□□□□ 0.29
PTN-201ENST00000348225 KLHL1Q9NR64 748 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 CHCHD3Q9NX63 227 aaKnown RBP16.87■□□□□ 0.29
PTN-201ENST00000348225 DKKL1Q9UK85 242 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 ERGIC3Q9Y282 383 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 ADAM18Q9Y3Q7 739 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 EML6Q6ZMW3 1958 aa16.87■□□□□ 0.29
PTN-201ENST00000348225 DOCK10Q96BY6 2186 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 SHISA8B8ZZ34 492 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 CDK2AP1O14519 115 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 TRMUO75648 421 aaKnown RBP16.86■□□□□ 0.29
PTN-201ENST00000348225 CBR3O75828 277 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 OR6A2O95222 327 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 LCKP06239 509 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 TFPIP10646 304 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 MYL12AP19105 171 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 DPP4P27487 766 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 GRPRP30550 384 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 ZNF362Q5T0B9 420 aaPredicted RBP16.86■□□□□ 0.29
PTN-201ENST00000348225 SLC6A19Q695T7 634 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 SDR9C7Q8NEX9 313 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 OR4K13Q8NH42 304 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 DTNBP1Q96EV8 351 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 UTP23Q9BRU9 249 aaKnown RBP16.86■□□□□ 0.29
PTN-201ENST00000348225 MND1Q9BWT6 205 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 MRPL39Q9NYK5 338 aaKnown RBP16.86■□□□□ 0.29
PTN-201ENST00000348225 LRFN1Q9P244 771 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 GVINP1Q7Z2Y8 2422 aa16.86■□□□□ 0.29
PTN-201ENST00000348225 FTCDNL1E5RQL4 147 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 G3V3Y1 287 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 TRIM3O75382 744 aaPredicted RBP16.85■□□□□ 0.29
PTN-201ENST00000348225 SDHAP31040 664 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 KLHL12Q53G59 568 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 GPR139Q6DWJ6 353 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 VASH2Q86V25 355 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 JAZF1Q86VZ6 243 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 GTPBP8Q8N3Z3 284 aaPredicted RBP16.85■□□□□ 0.29
PTN-201ENST00000348225 SCAIQ8N9R8 606 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 ATP6V1C2Q8NEY4 427 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 ISOC1Q96CN7 298 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 NXPE2Q96DL1 559 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 DNAJA3Q96EY1 480 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 MED20Q9H944 212 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 GRHPRQ9UBQ7 328 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 EXOSC1Q9Y3B2 195 aaKnown RBP16.85■□□□□ 0.29
PTN-201ENST00000348225 CNOT1A5YKK6 2376 aaKnown RBP16.85■□□□□ 0.29
PTN-201ENST00000348225 FAM186AA6NE01 2351 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 TEX13CA0A0J9YWL9 993 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 H3BML4 177 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 MYL12BO14950 172 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 TXNDC12O95881 172 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 PTHP01270 115 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 F13BP05160 661 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 TCEA1P23193 301 aaKnown RBP16.85■□□□□ 0.29
PTN-201ENST00000348225 ATP6V1E1P36543 226 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 CLK1P49759 484 aaKnown RBP16.85■□□□□ 0.29
PTN-201ENST00000348225 TMBIM6P55061 237 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 RPS7P62081 194 aaKnown RBP16.85■□□□□ 0.29
PTN-201ENST00000348225 CAMK2BQ13554 666 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 FAM122BQ7Z309 247 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 GALNT16Q8N428 558 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 CYB561A3Q8NBI2 242 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 LSM14AQ8ND56 463 aaKnown RBP16.85■□□□□ 0.29
PTN-201ENST00000348225 PTP4A1Q93096 173 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 GNRHR2Q96P88 292 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 RACGAP1Q9H0H5 632 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 OR51V1Q9H2C8 321 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 INIPQ9NRY2 104 aa16.85■□□□□ 0.29
PTN-201ENST00000348225 TAS2R16Q9NYV7 291 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms