RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ERMAPQ96PL5 475 aaPredicted RBP9.9□□□□□ -0.82
ECM1-201ENST00000346569 SIGLEC12Q96PQ1 595 aa9.9□□□□□ -0.82
ECM1-201ENST00000346569 TUBA1CQ9BQE3 449 aa9.9□□□□□ -0.82
ECM1-201ENST00000346569 UTP23Q9BRU9 249 aaKnown RBP9.9□□□□□ -0.82
ECM1-201ENST00000346569 RBM38Q9H0Z9 239 aaKnown RBP9.9□□□□□ -0.82
ECM1-201ENST00000346569 ZNF552Q9H707 407 aaPredicted RBP9.9□□□□□ -0.82
ECM1-201ENST00000346569 SERINC1Q9NRX5 453 aa9.9□□□□□ -0.82
ECM1-201ENST00000346569 MRPL39Q9NYK5 338 aaKnown RBP9.9□□□□□ -0.82
ECM1-201ENST00000346569 GPR83Q9NYM4 423 aa9.9□□□□□ -0.82
ECM1-201ENST00000346569 ABI3Q9P2A4 366 aa9.9□□□□□ -0.82
ECM1-201ENST00000346569 SSUH2Q9Y2M2 353 aa9.9□□□□□ -0.82
ECM1-201ENST00000346569 SNX5Q9Y5X3 404 aa9.9□□□□□ -0.82
ECM1-201ENST00000346569 A0A0G2JMM0 328 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 SMIM31A0A1B0GVY4 71 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 A0A1W2PPB8 328 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 A0A1W2PRS3 328 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 LRRC3CA6NJW4 275 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 KIR3DP1A8MWS1 328 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 MS4A18H0YCH9 400 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 PLPP3O14495 311 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 AHSA1O95433 338 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 DBTP11182 482 aaKnown RBP9.9□□□□□ -0.83
ECM1-201ENST00000346569 HIST1H1CP16403 213 aaKnown RBP9.9□□□□□ -0.83
ECM1-201ENST00000346569 GRPRP30550 384 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 CTXN1P60606 82 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 RPL18Q07020 188 aaKnown RBP9.9□□□□□ -0.83
ECM1-201ENST00000346569 MFSD13AQ14CX5 517 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 SGCBQ16585 318 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 MS4A18Q3C1V0 323 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 KLHL22Q53GT1 634 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 ALG10Q5BKT4 473 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 RNLSQ5VYX0 342 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 BORAQ6PGQ7 559 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 NHLRC1Q6VVB1 395 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 CXXC5Q7LFL8 322 aaKnown RBP9.9□□□□□ -0.83
ECM1-201ENST00000346569 IGFN1Q86VF2 1251 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 SLC37A3Q8NCC5 494 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 NPEPL1Q8NDH3 523 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 SLC25A36Q96CQ1 311 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 PLEKHA8Q96JA3 519 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 UBL7Q96S82 380 aaPredicted RBP9.9□□□□□ -0.83
ECM1-201ENST00000346569 TAPBPLQ9BX59 468 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 HCAR1Q9BXC0 346 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 CDCA4Q9BXL8 241 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 FAM192AQ9GZU8 254 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 RNF32Q9H0A6 362 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 FGF20Q9NP95 211 aaPredicted RBP9.9□□□□□ -0.83
ECM1-201ENST00000346569 PLA2G3Q9NZ20 509 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 KLHL21Q9UJP4 597 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 POLHQ9Y253 713 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 SLC6A5Q9Y345 797 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 ADAM18Q9Y3Q7 739 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 CORINQ9Y5Q5 1042 aa9.9□□□□□ -0.83
ECM1-201ENST00000346569 CACNA1BQ00975 2339 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 CNTRLQ7Z7A1 2325 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 PINLYPA6NC86 204 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 LIPT2A6NK58 231 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 ZNF891A8MT65 544 aaPredicted RBP9.89□□□□□ -0.83
ECM1-201ENST00000346569 FAM47E-STBD1D6RA91 191 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 H3BSA7 217 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 LOC400499M0QZD8 3231 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 F10P00742 488 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 RFPL3SP0C7P2 107 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 PRKAR1AP10644 381 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 HTR1FP30939 366 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 SRD5A2P31213 254 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 TTKP33981 857 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 MAP2K4P45985 399 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 B3GALT5-AS1P59052 145 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 ERVK-25P63136 954 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 MFAP5Q13361 173 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 OR1C1Q15619 314 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 AGAP7PQ5VUJ5 663 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 SLC6A19Q695T7 634 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 C3orf33Q6P1S2 294 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 ARHGAP11AQ6P4F7 1023 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 IGFL2Q6UWQ7 119 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 LINC00696Q6ZRV3 163 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 MEPCEQ7L2J0 689 aaKnown RBP9.89□□□□□ -0.83
ECM1-201ENST00000346569 NANOGNBQ7Z5D8 188 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 STX19Q8N4C7 294 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 SVOPQ8N4V2 548 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 MDS2Q8NDY4 140 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 BBS1Q8NFJ9 593 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 OR5M1Q8NGP8 315 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 SLC25A43Q8WUT9 341 aaPredicted RBP9.89□□□□□ -0.83
ECM1-201ENST00000346569 RFKQ969G6 155 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 MUL1Q969V5 352 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 DGCR14Q96DF8 476 aaKnown RBP9.89□□□□□ -0.83
ECM1-201ENST00000346569 LGALS12Q96DT0 336 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 DNAJA3Q96EY1 480 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 AGAP4Q96P64 663 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 TEAD3Q99594 435 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 FAM173AQ9BQD7 235 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 KATNB1Q9BVA0 655 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 SCNM1Q9BWG6 230 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 NMNAT2Q9BZQ4 307 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 CCDC90BQ9GZT6 254 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 MED20Q9H944 212 aa9.89□□□□□ -0.83
ECM1-201ENST00000346569 ZFP64Q9NPA5 681 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms