RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 FRMD1Q8N878 549 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 SLC23A2Q9UGH3 650 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 RHBDD3Q9Y3P4 386 aa18.1■□□□□ 0.49
HDAC4-201ENST00000345617 NRP1O14786 923 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 TYRP1P17643 537 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 RABIFP47224 123 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 SYT6Q5T7P8 510 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 MR1Q95460 341 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 HRASLS5Q96KN8 279 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 IER3IP1Q9Y5U9 82 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 MYO7BQ6PIF6 2116 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 ACSS1Q9NUB1 689 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 MUTYHQ9UIF7 546 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 OSGIN1Q9UJX0 560 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 XKRY2A2RUG3 117 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 DIO2Q92813 273 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 STRAPQ9Y3F4 350 aaKnown RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 USP2O75604 605 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 CSNK1A1P48729 337 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 OR2L13Q8N349 312 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 PRSS35Q8N3Z0 413 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 GATSQ8NAP1 163 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 LGALS14Q8TCE9 139 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 HHIPL1Q96JK4 782 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 ZNF44P15621 663 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 DPP4P27487 766 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 DCAF7P61962 342 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 BPHLQ86WA6 291 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 ZNF331Q9NQX6 463 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 FEZF1A0PJY2 475 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 AP1G1O43747 822 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 COTL1Q14019 142 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 USP51Q70EK9 711 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 CBARPQ8N350 705 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 KHSRPQ92945 711 aaKnown RBP eCLIP18.09■□□□□ 0.492e-6■■■□□ 18
HDAC4-201ENST00000345617 ACKR4Q9NPB9 350 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 ZNF443Q9Y2A4 671 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 ZNF860A6NHJ4 632 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 LEFTY2O00292 366 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 JMJD7P0C870 316 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 HOXA1P49639 335 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 RABGGTBP53611 331 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 ADIRFQ15847 76 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 ADGRG3Q86Y34 549 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 MKXQ8IYA7 352 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 GNPNAT1Q96EK6 184 aaPredicted RBP18.09■□□□□ 0.49
HDAC4-201ENST00000345617 OR5B2Q96R09 309 aa18.09■□□□□ 0.49
HDAC4-201ENST00000345617 THBS1P07996 1170 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 DGKZQ13574 1117 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 KIR2DS3Q14952 304 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 CHADLQ6NUI6 762 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 Q6ZNX1 250 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 BORCS6Q96GS4 357 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 SCLYQ96I15 445 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 OR52D1Q9H346 318 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 SULT1C4O75897 302 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 MAOBP27338 520 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 PDZK1IP1Q13113 114 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 GGTA1PQ4G0N0 100 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 SLC16A6O15403 523 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 CIDEAO60543 219 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 PIP5KL1Q5T9C9 394 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 SLX4IPQ5VYV7 408 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 Q6ZVL8 140 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 CLECL1Q8IZS7 167 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 OR4A16Q8NH70 328 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 ARV1Q9H2C2 271 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 DOCK7Q96N67 2140 aa18.08■□□□□ 0.49
HDAC4-201ENST00000345617 M0R3H8 397 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 CFHP08603 1231 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 FCRLAQ7L513 359 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 ADAM29Q9UKF5 820 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 HOXB5P09067 269 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 IQCJQ1A5X6 159 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 PIWIL3Q7Z3Z3 882 aaKnown RBP18.08■□□□□ 0.48
HDAC4-201ENST00000345617 SLC22A24Q8N4F4 322 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 NUDT21O43809 227 aaKnown RBP18.08■□□□□ 0.48
HDAC4-201ENST00000345617 TCRBP04435 133 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 JUNBP17275 347 aaPredicted RBP18.08■□□□□ 0.48
HDAC4-201ENST00000345617 POU3F3P20264 500 aaPredicted RBP18.08■□□□□ 0.48
HDAC4-201ENST00000345617 RELTQ969Z4 430 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 SPHK1Q9NYA1 384 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 GPR34Q9UPC5 381 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 A0A0B4J2A0 478 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 PRAMEF27A3QJZ7 478 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 A8MU76 341 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 ADH4P08319 380 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 NDUFA6P56556 154 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 PRAMEF9Q5VWM5 478 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 LPAR4Q99677 370 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 NECAP2Q9NVZ3 263 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 SHPKQ9UHJ6 478 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 LHX6Q9UPM6 363 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 RREB1Q92766 1687 aa18.08■□□□□ 0.48
HDAC4-201ENST00000345617 SOD2P04179 222 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 FUT1P19526 365 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 C5AR1P21730 350 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 SEC61A1P61619 476 aaKnown RBP18.07■□□□□ 0.48
HDAC4-201ENST00000345617 TMEM201Q5SNT2 666 aa18.07■□□□□ 0.48
HDAC4-201ENST00000345617 TMUB2Q71RG4 321 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms