RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 ARHGDIGQ99819 225 aa14.34□□□□□ -0.11
PTPRU-201ENST00000345512 PRDM7Q9NQW5 492 aa14.34□□□□□ -0.11
PTPRU-201ENST00000345512 DUSP22Q9NRW4 184 aa14.34□□□□□ -0.11
PTPRU-201ENST00000345512 C19orf53Q9UNZ5 99 aaPredicted RBP14.34□□□□□ -0.11
PTPRU-201ENST00000345512 LSM2Q9Y333 95 aaKnown RBP14.34□□□□□ -0.11
PTPRU-201ENST00000345512 ASCC3Q8N3C0 2202 aaKnown RBP14.34□□□□□ -0.11
PTPRU-201ENST00000345512 GPR171O14626 319 aa14.33□□□□□ -0.11
PTPRU-201ENST00000345512 BEX5Q5H9J7 111 aa14.33□□□□□ -0.11
PTPRU-201ENST00000345512 ABI3BPQ7Z7G0 1075 aa14.33□□□□□ -0.11
PTPRU-201ENST00000345512 ZNF546Q86UE3 836 aa14.33□□□□□ -0.11
PTPRU-201ENST00000345512 CMTM4Q8IZR5 234 aa14.33□□□□□ -0.11
PTPRU-201ENST00000345512 C12orf45Q8N5I9 185 aaPredicted RBP14.33□□□□□ -0.11
PTPRU-201ENST00000345512 PPP1R14AQ96A00 147 aa14.33□□□□□ -0.11
PTPRU-201ENST00000345512 Q96M85 177 aa14.33□□□□□ -0.11
PTPRU-201ENST00000345512 DERL3Q96Q80 235 aa14.33□□□□□ -0.11
PTPRU-201ENST00000345512 PSME4Q14997 1843 aa14.33□□□□□ -0.11
PTPRU-201ENST00000345512 GOLGB1Q14789 3259 aaKnown RBP14.33□□□□□ -0.11
PTPRU-201ENST00000345512 A0A0J9YY10 115 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF736B4DX44 427 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 PHYHO14832 338 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF35P13682 527 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 HNRNPA2B1P22626 353 aaKnown RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 EIF5AL1Q6IS14 154 aaKnown RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 HEPHL1Q6MZM0 1159 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 TSEN54Q7Z6J9 526 aaKnown RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 TBC1D29Q9UFV1 150 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 HYAL3O43820 417 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 RASGEF1BQ0VAM2 473 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 TANGO2Q6ICL3 276 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 MAMDC2Q7Z304 686 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 RNASE11Q8TAA1 199 aaKnown RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 RBP7Q96R05 134 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 ABHD1Q96SE0 405 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 POLMQ9NP87 494 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 THAP10Q9P2Z0 257 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 MGAMO43451 1857 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 BRCA1P38398 1863 aaKnown RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 RALGAPA2Q2PPJ7 1873 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 EP400Q96L91 3159 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF878C9JN71 531 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 GABARAPH6UMI1 98 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 PRH1P02810 166 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 HOXB3P14651 431 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 CD53P19397 219 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
PTPRU-201ENST00000345512 S100A11P31949 105 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 PLCXD2Q0VAA5 305 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 TSSK4Q6SA08 328 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 SLC35D2Q76EJ3 337 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 OR51D1Q8NGF3 324 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 CHAC2Q8WUX2 184 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 SLC6A20Q9NP91 592 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 MEMO1Q9Y316 297 aa14.33□□□□□ -0.12
PTPRU-201ENST00000345512 TSPAN11A1L157 253 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 CDC42EP2O14613 210 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 DCNP07585 359 aaKnown RBP14.32□□□□□ -0.12
PTPRU-201ENST00000345512 EPXP11678 715 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 TMEM185AQ8NFB2 350 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 TGM7Q96PF1 710 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 ADOQ96SZ5 270 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 SLC6A17Q9H1V8 727 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 ELOVL3Q9HB03 270 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 NYNRINQ9P2P1 1898 aaKnown RBP14.32□□□□□ -0.12
PTPRU-201ENST00000345512 FGF17O60258 216 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF806P0C7X5 589 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 UBL4AP11441 157 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 HTR2AP28223 471 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 CDK5R1Q15078 307 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 OVCH1Q7RTY7 1134 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 ZNF454Q8N9F8 522 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 DNAAF1Q8NEP3 725 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 SMIM19Q96E16 107 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 KLHDC7BQ96G42 594 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 DHRS9Q9BPW9 319 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 RNF32Q9H0A6 362 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 MEPEQ9NQ76 525 aaPredicted RBP14.32□□□□□ -0.12
PTPRU-201ENST00000345512 C20orf141Q9NUB4 165 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 PGCP20142 388 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 SLC6A9P48067 706 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 LSSP48449 732 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 TCTN1Q2MV58 587 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 RNLSQ5VYX0 342 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 OR7E24Q6IFN5 339 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 LYPD8Q6UX82 237 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 TTLL10Q6ZVT0 673 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 CD163Q86VB7 1156 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 LMX1AQ8TE12 382 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 CPNE7Q9UBL6 633 aa14.32□□□□□ -0.12
PTPRU-201ENST00000345512 PAPLNO95428 1278 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 RAD52P43351 418 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 YOD1Q5VVQ6 348 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 DEFB119Q8N690 84 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 TP53I13Q8NBR0 393 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 STOML3Q8TAV4 291 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 SPPL3Q8TCT6 385 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 DVL3Q92997 716 aaPredicted RBP14.31□□□□□ -0.12
PTPRU-201ENST00000345512 WFDC6Q9BQY6 131 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 HRASLSQ9HDD0 168 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 A0A1W2PS29 197 aa14.31□□□□□ -0.12
PTPRU-201ENST00000345512 E9PI62 339 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms