RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ZMAT3Q9HA38 289 aaKnown RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 ZDHHC4Q9NPG8 344 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 EXO1Q9UQ84 846 aaKnown RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 OR5H14A6NHG9 310 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 NSA2O95478 260 aaKnown RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 GABRR1P24046 479 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 MFGE8Q08431 387 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 IAH1Q2TAA2 248 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 PKDCCQ504Y2 493 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 YOD1Q5VVQ6 348 aaPredicted RBP11.26□□□□□ -0.61
COL12A1-202ENST00000345356 OR7E24Q6IFN5 339 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 NIPAL3Q6P499 406 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 TMEM71Q6P5X7 295 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 FBXW12Q6X9E4 464 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 MBOAT2Q6ZWT7 520 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 FOXN4Q96NZ1 517 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 STEAP1Q9UHE8 339 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 LTN1O94822 1766 aa11.26□□□□□ -0.61
COL12A1-202ENST00000345356 POM121BA6NF01 834 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 HIDE1A8MVS5 230 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 NME2P1O60361 137 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 CBX7O95931 251 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 MTHFD2P13995 350 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF250P15622 560 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 TYRP1P17643 537 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 SLC11A1P49279 550 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 SHC2P98077 582 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 CLINT1Q14677 625 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 ESPNLQ6ZVH7 1005 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 OR5AR1Q8NGP9 310 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 DPF3Q92784 378 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 MMABQ96EY8 250 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-202ENST00000345356 SGCZQ96LD1 299 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 ELF4Q99607 663 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-202ENST00000345356 IKZF5Q9H5V7 419 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 MSTNO14793 375 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 TGOLN2O43493 480 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 F2P00734 622 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 CD53P19397 219 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 TAS2R46P59540 309 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 HNRNPKP61978 463 aaKnown RBP eCLIP11.25□□□□□ -0.61
COL12A1-202ENST00000345356 CRMP1Q14194 572 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 BAGE3Q86Y29 109 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 BAGE2Q86Y30 109 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 SYT17Q9BSW7 474 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 ELOVL2Q9NXB9 296 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 FBXO7Q9Y3I1 522 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 CRABP1P29762 137 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 AKR1C3P42330 323 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 PLCXD2Q0VAA5 305 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 CAMK2DQ13557 499 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 ADIRFQ15847 76 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 LY6G5CQ5SRR4 150 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 PRICKLE2Q7Z3G6 844 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 FAM26EQ8N5C1 309 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 PTCHD1Q96NR3 888 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 MYADMQ96S97 322 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 TMEM38AQ9H6F2 299 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 CD300LBA8K4G0 201 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 FKTNO75072 461 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 KCNJ5P48544 419 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 GLO1Q04760 184 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.25□□□□□ -0.61
COL12A1-202ENST00000345356 RNF208Q9H0X6 261 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 PPT2Q9UMR5 302 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF840PA6NDX5 716 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 TMEM212A6NML5 194 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 SGK494L7N484 410 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 LAP3P28838 519 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF74Q16587 644 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 FAHD1Q6P587 224 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 FAM185AQ8N0U4 392 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF439Q8NDP4 499 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 BPIFCQ8NFQ6 507 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 BCL7CQ8WUZ0 217 aaPredicted RBP11.25□□□□□ -0.61
COL12A1-202ENST00000345356 LINC00052Q96N35 136 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 C16orf70Q9BSU1 422 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 CHRDQ9H2X0 955 aa11.25□□□□□ -0.61
COL12A1-202ENST00000345356 MRPL22Q9NWU5 206 aaKnown RBP11.25□□□□□ -0.61
COL12A1-202ENST00000345356 LGI1O95970 557 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 ELNP15502 786 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 CD1EP15812 388 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 RGRP47804 291 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 ZNF84P51523 738 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 OR10A3P58181 314 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 FOXK2Q01167 660 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 CAMK2BQ13554 666 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 COTL1Q14019 142 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 Q6ZTK2 550 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 NLGN4YQ8NFZ3 816 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-202ENST00000345356 ATF6BQ99941 703 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 PIGQQ9BRB3 760 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 SLCO5A1Q9H2Y9 848 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 CXorf36Q9H7Y0 433 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 CICQ96RK0 1608 aaPredicted RBP11.24□□□□□ -0.61
COL12A1-202ENST00000345356 TIAM2Q8IVF5 1701 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
COL12A1-202ENST00000345356 PTGESO14684 152 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms