RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 A0A1B0GTI1 187 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 GRXCR1A8MXD5 290 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 F8VVB4 439 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 F8VWA3 439 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 PSMD9O00233 223 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 FOXE1O00358 373 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-201ENST00000343524 GPRIN2O60269 458 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 DNAJB6O75190 326 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 F2P00734 622 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 SFTA3P0C7M3 94 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 NQO2P16083 231 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 GABRR2P28476 465 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 CEACAM6P40199 344 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 OPRD1P41143 372 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 AKR1C2P52895 323 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 CASP9P55211 416 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 OC90Q02509 493 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-201ENST00000343524 AKR1C1Q04828 323 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 ARHGAP1Q07960 439 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 ST3GAL3Q11203 375 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 AIMP2Q13155 320 aaKnown RBP7.49□□□□□ -1.21
ATG4A-201ENST00000343524 CBFBQ13951 182 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 GAS6Q14393 721 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 RHEBQ15382 184 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 C1orf53Q5VUE5 145 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 FAM71E1Q6IPT2 247 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 MED27Q6P2C8 311 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 FAM199XQ6PEV8 388 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-201ENST00000343524 SSX6Q7RTT6 188 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 DPPA2Q7Z7J5 298 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 FBXO16Q8IX29 292 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-201ENST00000343524 NXPE1Q8N323 547 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 ARRDC1Q8N5I2 433 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 ZNF383Q8NA42 475 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 STEAP2Q8NFT2 490 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 OR52L1Q8NGH7 329 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 OR4Q3Q8NH05 313 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 OR6X1Q8NH79 312 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 SKA2Q8WVK7 121 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-201ENST00000343524 ASB11Q8WXH4 323 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 SLC25A28Q96A46 364 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 ZNF75AQ96N20 296 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 MAP3K3Q99759 626 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 ADAM2Q99965 735 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 SLC25A21Q9BQT8 299 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-201ENST00000343524 BOCQ9BWV1 1114 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 POTEKPQ9BYX7 375 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 SPATC1LQ9H0A9 340 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 SUV39H2Q9H5I1 410 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 C19orf12Q9NSK7 152 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 CALML5Q9NZT1 146 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 MSRAQ9UJ68 235 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 SLC13A4Q9UKG4 626 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 FOXJ3Q9UPW0 622 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 MRPL42Q9Y6G3 142 aaKnown RBP7.49□□□□□ -1.21
ATG4A-201ENST00000343524 PLXNA4Q9HCM2 1894 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 CHD9Q3L8U1 2897 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 MYO9BQ13459 2157 aa7.49□□□□□ -1.21
ATG4A-201ENST00000343524 TBC1D3DA0A087WVF3 549 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ELOA3CA0A087WX78 387 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TBC1D3IA0A087WXS9 549 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TBC1D3EA0A087X179 549 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TBC1D3KA0A087X1G2 549 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 SMIM35A0A1B0GVV1 85 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 FAM221BA6H8Z2 402 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TBC1D3FA6NER0 549 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 URADA6NGE7 173 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 OR6C76A6NM76 312 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TBC1D3LB9A6J9 549 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 H7C1Q1 480 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PTGESO14684 152 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 BCAT2O15382 392 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TBX19O60806 448 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 GPR32O75388 356 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PCDH8O95206 1070 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 POMCP01189 267 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 RHOP08100 348 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 HOXB5P09067 269 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 CLTBP09497 229 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 HKR1P10072 659 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 NDUFV2P19404 249 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 HOXA5P20719 270 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 NFYBP25208 207 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 DCTDP32321 178 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PTH2RP49190 550 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TAS2R41P59536 307 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TAS2R20P59543 309 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PFN3P60673 137 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ST8SIA6P61647 398 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 RAB1AP62820 205 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TWF1Q12792 350 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TEAD2Q15562 447 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 INPP5JQ15735 1006 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 PLEKHN1Q494U1 663 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-201ENST00000343524 FAM27D1Q5T7N8 215 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 NSUN5P2Q63ZY6 315 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 TBC1D3CQ6IPX1 549 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ZNF620Q6ZNG0 422 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 ESPNLQ6ZVH7 1005 aa7.48□□□□□ -1.21
ATG4A-201ENST00000343524 THOC6Q86W42 341 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms