RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MYO10Q9HD67 2058 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 TRAV27A0A087WT01 109 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 ACOD1A6NK06 481 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 PRSS44E7EML9 344 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 MAGEB4O15481 346 aaPredicted RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 ERI3O43414 337 aaKnown RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 APOC1P02654 83 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 CSF1P09603 554 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 CFPP27918 469 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 SLC6A6P31641 620 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 RPL35P42766 123 aaKnown RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 HCCSP53701 268 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 GPR85P60893 370 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 PRDX1Q06830 199 aaKnown RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 LGALS3BPQ08380 585 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 RPE65Q16518 533 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 LY6G6FQ5SQ64 297 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 DHRS7BQ6IAN0 325 aaPredicted RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 JMJD6Q6NYC1 403 aaPredicted RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 RNF180Q86T96 592 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 DND1Q8IYX4 353 aaKnown RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 CDK20Q8IZL9 346 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 ARL14Q8N4G2 192 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 OR2L5Q8NG80 312 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 ZMYND19Q96E35 227 aaPredicted RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 TTTY10Q9BZA0 68 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 FAM117AQ9C073 453 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF304Q9HCX3 659 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 C14orf105Q9NVL8 296 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 C2orf42Q9NWW7 574 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 CHRNA9Q9UGM1 479 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 PRKAB1Q9Y478 270 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 PLEKHM1Q9Y4G2 1056 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 XRCC3O43542 346 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 RNGTTO60942 597 aaKnown RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 NID1P14543 1247 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 CSF2RBP32927 897 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 RFC3P40938 356 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 MEOX2P50222 304 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 CLDN12P56749 244 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 PPIAP62937 165 aaKnown RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 ERVK-25P63136 954 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 DCDP81605 110 aaKnown RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 C10orf91Q5T1B1 145 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 AMZ2Q86W34 360 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 LSRQ86X29 649 aaPredicted RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF619Q8N2I2 560 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 LINC00469Q8N7U9 141 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 OR7G2Q8NG99 324 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 STK35Q8TDR2 534 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 COX14Q96I36 57 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 C10orf90Q96M02 699 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 SDF2Q99470 211 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF426Q9BUY5 554 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 SLC46A2Q9BY10 475 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 MYOZ1Q9NP98 299 aaPredicted RBP8.87□□□□□ -0.99
HOXA1-201ENST00000343060 BIN3Q9NQY0 253 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 CTSFQ9UBX1 484 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 SLC23A2Q9UGH3 650 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 MLXQ9UH92 298 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 GNG8Q9UK08 70 aa8.87□□□□□ -0.99
HOXA1-201ENST00000343060 A0A1B0GTI1 187 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 BCL2L11O43521 198 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 OR2F2O95006 317 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 DBIP07108 87 aaKnown RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 SLC25A4P12235 298 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 C6P13671 934 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 CERS1P27544 350 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 ADH7P40394 386 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 FLT3LGP49771 235 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 DIO1P49895 249 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 STX4Q12846 297 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 OR2F1Q13607 317 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 DUSP5Q16690 384 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 NDUFAF6Q330K2 333 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 PCGF3Q3KNV8 242 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 FAM74A1Q5RGS3 127 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF684Q5T5D7 378 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 MRPL2Q5T653 305 aaKnown RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 METRNLQ641Q3 311 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 ZNF613Q6PF04 617 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 STAC2Q6ZMT1 411 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 LRRTM1Q86UE6 522 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 NRROSQ86YC3 692 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 LDLRAD3Q86YD5 345 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 IFNL1Q8IU54 200 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 PUSL1Q8N0Z8 303 aaKnown RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 SVBPQ8N300 66 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 OR1M1Q8NGA1 313 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 SNX33Q8WV41 574 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 TNFAIP8L1Q8WVP5 186 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 IRF7Q92985 503 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 ARMC5Q96C12 935 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 NARS2Q96I59 477 aaKnown RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 WDR13Q9H1Z4 485 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 CCDC86Q9H6F5 360 aaKnown RBP8.86□□□□□ -0.99
HOXA1-201ENST00000343060 MOKQ9UQ07 419 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 TMEM218A2RU14 115 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 LINC01387J3KSC0 135 aa8.86□□□□□ -0.99
HOXA1-201ENST00000343060 RBBP9O75884 186 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms