RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 MOB3CQ70IA8 216 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 KRTCAP2Q8N6L1 136 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 ZNF860A6NHJ4 632 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 POM121CA8CG34 1229 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 PDGFBP01127 241 aaPredicted RBP16.51■□□□□ 0.23
SMAD4-201ENST00000342988 CPOXP36551 454 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 TIPARPQ7Z3E1 657 aaKnown RBP16.51■□□□□ 0.23
SMAD4-201ENST00000342988 AP5S1Q9NUS5 200 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 PISDQ9UG56 409 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 KDM4FA0A1W2PPD8 638 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 JTBO76095 146 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 ACOT6Q3I5F7 207 aaPredicted RBP16.51■□□□□ 0.23
SMAD4-201ENST00000342988 ENTHD1Q8IYW4 607 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 BARHL1Q9BZE3 327 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 PRDM4Q9UKN5 801 aa16.51■□□□□ 0.23
SMAD4-201ENST00000342988 FGF4P08620 206 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 FAM163BP0C2L3 166 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 ATXN1LP0C7T5 689 aaKnown RBP16.5■□□□□ 0.23
SMAD4-201ENST00000342988 GABRA5P31644 462 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 CASP7P55210 303 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 ZNF322Q6U7Q0 402 aaPredicted RBP16.5■□□□□ 0.23
SMAD4-201ENST00000342988 FAAP24Q9BTP7 215 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 SLC12A9Q9BXP2 914 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 EBF1Q9UH73 591 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 ADM5C9JUS6 153 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 HSPB6O14558 160 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 FA2HQ7L5A8 372 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 MENTQ9BUN1 341 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 FZD7O75084 574 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 OR4Q2P0C623 313 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 SLCO2A1Q92959 643 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 TSLPQ969D9 159 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 SLC6A20Q9NP91 592 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 KCNG2Q9UJ96 466 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 KIAA0141Q14154 515 aaPredicted RBP16.5■□□□□ 0.23
SMAD4-201ENST00000342988 OR9I1Q8NGQ6 314 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 LILRB4Q8NHJ6 448 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 CLIC3O95833 236 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 GNB1P62873 340 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 OR8G2PQ6IF36 304 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 ZFP90Q8TF47 636 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 FAM103A1Q9BTL3 118 aaKnown RBP16.5■□□□□ 0.23
SMAD4-201ENST00000342988 CEP170BQ9Y4F5 1589 aaPredicted RBP16.5■□□□□ 0.23
SMAD4-201ENST00000342988 PRICKLE3O43900 615 aaPredicted RBP16.5■□□□□ 0.23
SMAD4-201ENST00000342988 DUSP1P28562 367 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 HBMQ6B0K9 141 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 SLC15A4Q8N697 577 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 OR51L1Q8NGJ5 315 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 NKX6-2Q9C056 277 aaPredicted RBP16.5■□□□□ 0.23
SMAD4-201ENST00000342988 NXPH2O95156 264 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 LYPLA2O95372 231 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 RPS24P62847 133 aaKnown RBP16.5■□□□□ 0.23
SMAD4-201ENST00000342988 MDGA2Q7Z553 956 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 WDR18Q9BV38 432 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 LHPPQ9H008 270 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 EPHX3Q9H6B9 360 aa16.5■□□□□ 0.23
SMAD4-201ENST00000342988 PHRF1Q9P1Y6 1649 aaKnown RBP16.5■□□□□ 0.23
SMAD4-201ENST00000342988 GAB1Q13480 694 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 OR7A5Q15622 319 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 NKAIN3Q8N8D7 197 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 OR4F5Q8NH21 305 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 OR4F4Q96R69 305 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 SERINC2Q96SA4 455 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 DNMT3BQ9UBC3 853 aaKnown RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 SEMG2Q02383 582 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 CLINT1Q14677 625 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 RNF212Q495C1 297 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 RHOUQ7L0Q8 258 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 GDPD3Q7L5L3 318 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 SLC6A18Q96N87 628 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 MED9Q9NWA0 146 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 BET1LQ9NYM9 111 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 GIMAP2Q9UG22 337 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 ENPP5Q9UJA9 477 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 SPATA31A1Q5TZJ5 1347 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 SPTBN1Q01082 2364 aaKnown RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 PHF1O43189 567 aaPredicted RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 OR7C1O76099 320 aaPredicted RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 ELAVL3Q14576 367 aaKnown RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 TMEM175Q9BSA9 504 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 MPC1LP0DKB6 136 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 GDF5P43026 501 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 FAM26DQ5JW98 314 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 SMOQ99835 787 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 POFUT1Q9H488 388 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 THSD1Q9NS62 852 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 S100A4P26447 101 aaKnown RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 C6orf136Q5SQH8 315 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 BLOC1S3Q6QNY0 202 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 MAMDC4Q6UXC1 1216 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 ABHD15Q6UXT9 468 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 NRMQ8IXM6 262 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 PEX11GQ96HA9 241 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 FEVQ99581 238 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 KCNJ15Q99712 375 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 SLC25A21Q9BQT8 299 aaPredicted RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 OR2J1Q9GZK6 312 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 WDR61Q9GZS3 305 aaKnown RBP16.49■□□□□ 0.23
SMAD4-201ENST00000342988 EMC9Q9Y3B6 208 aa16.49■□□□□ 0.23
SMAD4-201ENST00000342988 WBP2NLQ6ICG8 309 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms