RNA–Protein interactions for RNA: ENST00000341990.8

CNTNAP3B-202, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-202ENST00000341990 PGDP52209 483 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 ERV3-1Q14264 604 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 ZNF511Q8NB15 262 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 SORCS2Q96PQ0 1159 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 LIN7BQ9HAP6 207 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 HRASLSQ9HDD0 168 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 POLE3Q9NRF9 147 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RPS6KB2Q9UBS0 482 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 IFITM5A6NNB3 132 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 GATBO75879 557 aaKnown RBP18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RPP14O95059 124 aaKnown RBP18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CCR9P51686 369 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 OR2T4Q8NH00 348 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CEP76Q8TAP6 659 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RNF166Q96A37 237 aaPredicted RBP18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CCDC3Q9BQI4 270 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CHIAQ9BZP6 476 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 NARFLQ9H6Q4 476 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 MKKSQ9NPJ1 570 aaPredicted RBP18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 HCN3Q9P1Z3 774 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 PEX14O75381 377 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 SLC35E2P0CK97 266 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 TYRP1P17643 537 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CAPZA2P47755 286 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 DYRK1AQ13627 763 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 EXOSC2Q13868 293 aaKnown RBP18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CMIPQ8IY22 773 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 GATSQ8NAP1 163 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 MOSPD2Q8NHP6 518 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 HOXB13Q92826 284 aaPredicted RBP18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 DDOQ99489 341 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 GLTPQ9NZD2 209 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CPNE7Q9UBL6 633 aa18.26■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CEP290O15078 2479 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 C2orf74A8MZ97 194 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 H3BSH0 61 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 LINC01565O15544 149 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 DPP4P27487 766 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 UNQ9370/PRO34162Q6UXP9 181 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RNF44Q7L0R7 432 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 NLRC3Q7RTR2 1065 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 FGD2Q7Z6J4 655 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 VSTM2LQ96N03 204 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 GAS2L1Q99501 681 aaPredicted RBP18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 GABRG3Q99928 467 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 LMAN2LQ9H0V9 348 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 LINC00862A6NCI5 91 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 ZNF879B4DU55 563 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 SNTA1Q13424 505 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 LMF1Q96S06 567 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 SEC22CQ9BRL7 303 aa18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 ZNF436Q9C0F3 470 aaPredicted RBP18.25■□□□□ 0.51
CNTNAP3B-202ENST00000341990 AIPO00170 330 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CTDSPLO15194 276 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 FOXS1O43638 330 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 EGFP01133 1207 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 MAT1AQ00266 395 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 GAS6Q14393 721 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 ZNHIT3Q15649 155 aaPredicted RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 KIAA1324Q6UXG2 1013 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 SLC38A6Q8IZM9 456 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 PMM1Q92871 262 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RIT1Q92963 219 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 Q96M85 177 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 LMF2Q9BU23 707 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 KLHDC2Q9Y2U9 406 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 TDRD6O60522 2096 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 A0A0A6YYC8 382 aaPredicted RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 I3L1I5 382 aaPredicted RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 ARPC1BO15143 372 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 HOXD11P31277 338 aaPredicted RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CDKN2AP42771 156 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 TNFRSF4P43489 277 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RAG2P55895 527 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RAB38P57729 211 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 COL28A1Q2UY09 1125 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 APOOLQ6UXV4 268 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 DNAAF1Q8NEP3 725 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RSC1A1Q92681 617 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 NXPE2Q96DL1 559 aa18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 C7orf50Q9BRJ6 194 aaKnown RBP18.24■□□□□ 0.51
CNTNAP3B-202ENST00000341990 A0A087WUJ7 227 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 A0A1B0GTH9 108 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 A0A1B0GVI7 797 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RPS10-NUDT3A0A1W2PQS6 291 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 BLOC1S5-TXNDC5H3BN57 136 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 CSTAP01040 98 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 HOXC4P09017 264 aaPredicted RBP18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 OR8G3PP0DMU2 310 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 ZNF250P15622 560 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 ST6GAL1P15907 406 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 RAD52P43351 418 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 PTH2RP49190 550 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 HSF2Q03933 536 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 LGALS3BPQ08380 585 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 ZNF267Q14586 743 aaPredicted RBP18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 SMUG1Q53HV7 270 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 LINC01590Q5TEZ4 76 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 LEG1Q6P5S2 330 aa18.23■□□□□ 0.51
CNTNAP3B-202ENST00000341990 DPY19L2P2Q6ZN68 376 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms