RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 PELOQ9BRX2 385 aaKnown RBP13.71□□□□□ -0.21
TPM3-208ENST00000341485 NOX1Q9Y5S8 564 aa13.71□□□□□ -0.21
TPM3-208ENST00000341485 EIF4EP06730 217 aaKnown RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 GSTT2P0CG29 244 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 GSTT2BP0CG30 244 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 NRG3P56975 720 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 BIKQ13323 160 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 BCL2A1Q16548 175 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.7□□□□□ -0.22
TPM3-208ENST00000341485 SFXN4Q6P4A7 337 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 UTS2BQ765I0 119 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 ZNRF4Q8WWF5 429 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 SLC7A6Q92536 515 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 ATOH1Q92858 354 aaPredicted RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 ZNF578Q96N58 590 aaPredicted RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 LRFN5Q96NI6 719 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 KCNJ15Q99712 375 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 TP63Q9H3D4 680 aaPredicted RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 CYSLTR2Q9NS75 346 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 LANCL2Q9NS86 450 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 RBFOX1Q9NWB1 397 aaKnown RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 RASD1Q9Y272 281 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 MMACHCQ9Y4U1 282 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 CLCA3PQ9Y6N3 262 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 A0A0G2JMP0 313 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 A0A0X1KG70 313 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 LNP1A1A4G5 178 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 D6RAR5 112 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 IMPA2O14732 288 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 FLRT2O43155 660 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 LYRM1O43325 122 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 OR7A10O76100 309 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 RCVRNP35243 200 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 NAA10P41227 235 aaPredicted RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 GGTLC2Q14390 218 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 ACSM3Q53FZ2 586 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 KLHL26Q53HC5 615 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 PLA2G2CQ5R387 149 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 TPRA1Q86W33 373 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 GATSQ8NAP1 163 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 OR4M2Q8NGB6 313 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 GHSRQ92847 366 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 TP53INP1Q96A56 240 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 KCTD12Q96CX2 325 aaKnown RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 DMRTB1Q96MA1 342 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 CNN2Q99439 309 aaKnown RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 DDX28Q9NUL7 540 aaKnown RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 NUFIP1Q9UHK0 495 aaKnown RBP13.7□□□□□ -0.22
TPM3-208ENST00000341485 ITGB1BP2Q9UKP3 347 aa13.7□□□□□ -0.22
TPM3-208ENST00000341485 IGKV1D-42A0A075B6H8 117 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 A0A1W2PRG6 482 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 OIP5O43482 229 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 PPM1BO75688 479 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 PRKAR1AP10644 381 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 RPL4P36578 427 aaKnown RBP13.69□□□□□ -0.22
TPM3-208ENST00000341485 CAPZA2P47755 286 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 SLC25A35Q3KQZ1 300 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 RHBDD2Q6NTF9 364 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 MZT2BQ6NZ67 158 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 TMEM53Q6P2H8 277 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 PLET1Q6UQ28 207 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 DPY19L2P2Q6ZN68 376 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 LRRC28Q86X40 367 aaPredicted RBP13.69□□□□□ -0.22
TPM3-208ENST00000341485 SLC35F2Q8IXU6 374 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 GHDCQ8N2G8 530 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 POMGNT2Q8NAT1 580 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 NPEPL1Q8NDH3 523 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 DUSP18Q8NEJ0 188 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 OR4M1Q8NGD0 313 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 ZPLD1Q8TCW7 415 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 PELI1Q96FA3 418 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 DDOQ99489 341 aa13.69□□□□□ -0.22
TPM3-208ENST00000341485 CCDC86Q9H6F5 360 aaKnown RBP13.69□□□□□ -0.22
TPM3-208ENST00000341485 TTC36A6NLP5 189 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 OGG1O15527 345 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 IDH3BO43837 385 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 SCRG1O75711 98 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 OR2T7P0C7T2 308 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 PSKH1P11801 424 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 SF3A2Q15428 464 aaKnown RBP13.68□□□□□ -0.22
TPM3-208ENST00000341485 CD226Q15762 336 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 ZFP69Q49AA0 526 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 FNDC7Q5VTL7 733 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 SLITRK4Q8IW52 837 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 ZNF321PQ8N8H1 164 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 SAMD12Q8N8I0 201 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 DTX3Q8N9I9 347 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 FAM71CQ8NEG0 241 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 OR2T27Q8NH04 317 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 CLIP3Q96DZ5 547 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 NMNAT3Q96T66 252 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 TTYH2Q9BSA4 534 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 OR2B2Q9GZK3 357 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 TMEM165Q9HC07 324 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 PNO1Q9NRX1 252 aaKnown RBP13.68□□□□□ -0.22
TPM3-208ENST00000341485 PRODH2Q9UF12 536 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 ZNF337Q9Y3M9 751 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 NCOR1O75376 2440 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 C17orf105B2RV13 164 aa13.68□□□□□ -0.22
TPM3-208ENST00000341485 NTN3O00634 580 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms