RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 MED13LQ71F56 2210 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 TRAV36DV7A0A075B6V5 113 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 A0A087WUJ7 227 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 CIB4A0PJX0 185 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 OR5H1A6NKK0 313 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 FMO6PO60774 539 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 VAMP5O95183 116 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 ITGA5P08648 1049 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 CD247P20963 164 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 GTF2E2P29084 291 aaKnown RBP12.87□□□□□ -0.35
ERCC1-203ENST00000340192 CRYBA2P53672 197 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 CDH12P55289 794 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 FOXG1P55316 489 aaPredicted RBP12.87□□□□□ -0.35
ERCC1-203ENST00000340192 NPTX1Q15818 432 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 NCMAPQ5T1S8 102 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 FAM69AQ5T7M9 428 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 TSPO2Q5TGU0 170 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 C5orf46Q6UWT4 87 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 CREB3L2Q70SY1 520 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 CCDC80Q76M96 950 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 AAED1Q7RTV5 226 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 P2RY8Q86VZ1 359 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 POU5F2Q8N7G0 328 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 OR6T1Q8NGN1 323 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 SLC26A7Q8TE54 656 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 RCN3Q96D15 328 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 MUCL1Q96DR8 90 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 MCHR1Q99705 422 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 ESRP2Q9H6T0 727 aaKnown RBP12.87□□□□□ -0.35
ERCC1-203ENST00000340192 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
ERCC1-203ENST00000340192 UPB1Q9UBR1 384 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 USP22Q9UPT9 525 aa12.87□□□□□ -0.35
ERCC1-203ENST00000340192 PDLIM1O00151 329 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 OR2T1O43869 369 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 FZD7O75084 574 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 PTNP21246 168 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 BSPH1Q075Z2 132 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 GABRA6Q16445 453 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 SWT1Q5T5J6 900 aaKnown RBP12.86□□□□□ -0.35
ERCC1-203ENST00000340192 C9orf135Q5VTT2 229 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 ZNF613Q6PF04 617 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 RBM45Q8IUH3 476 aaKnown RBP12.86□□□□□ -0.35
ERCC1-203ENST00000340192 EPHX4Q8IUS5 362 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 KDM8Q8N371 416 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 OR4D11Q8NGI4 311 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 RP9Q8TA86 221 aaKnown RBP12.86□□□□□ -0.35
ERCC1-203ENST00000340192 VANGL1Q8TAA9 524 aaPredicted RBP12.86□□□□□ -0.35
ERCC1-203ENST00000340192 RASSF5Q8WWW0 418 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 ZNF583Q96ND8 569 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 CCL19Q99731 98 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 SLCO5A1Q9H2Y9 848 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 RNF115Q9Y4L5 304 aa12.86□□□□□ -0.35
ERCC1-203ENST00000340192 DPRXA6NFQ7 191 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 CPSF4LA6NMK7 179 aaKnown RBP12.85□□□□□ -0.35
ERCC1-203ENST00000340192 M0R082 166 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 HS3ST1O14792 307 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 AIM2O14862 343 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 CLOCKO15516 846 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 CCDC22O60826 627 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 CD3EP07766 207 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 COX4I1P13073 169 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 CBLP22681 906 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 GRPRP30550 384 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 SELENOPP49908 381 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 SEC24CP53992 1094 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 ENTPD8Q5MY95 495 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 OR7E24Q6IFN5 339 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 SSX8Q7RTT4 187 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 SPATA21Q7Z572 469 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 TGIF2LYQ8IUE0 185 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 POMGNT2Q8NAT1 580 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 OR52N5Q8NH56 324 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 ZNF417Q8TAU3 575 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 AKAP1Q92667 903 aaKnown RBP eCLIP12.85□□□□□ -0.35
ERCC1-203ENST00000340192 PIGTQ969N2 578 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 MUS81Q96NY9 551 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 ZNF587Q96SQ5 575 aaPredicted RBP12.85□□□□□ -0.35
ERCC1-203ENST00000340192 EPYCQ99645 322 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 NPAP1Q9NZP6 1156 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 B3GAT1Q9P2W7 334 aa12.85□□□□□ -0.35
ERCC1-203ENST00000340192 A0A1W2PR80 420 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 FAM220BPB1ANY3 271 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 CHP2O43745 196 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 KRT33AO76009 404 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 BGLAPP02818 100 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 ZNF43P17038 809 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 MPGP29372 298 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 ADAM8P78325 824 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 LGALS3BPQ08380 585 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 VEZF1Q14119 521 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 NIPAL3Q6P499 406 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 ERICH5Q6P6B1 374 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 LINC00114Q6XXX2 140 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 H1FNTQ75WM6 255 aaPredicted RBP12.84□□□□□ -0.35
ERCC1-203ENST00000340192 TSPYL5Q86VY4 417 aaPredicted RBP12.84□□□□□ -0.35
ERCC1-203ENST00000340192 OR6S1Q8NH40 331 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 LILRB1Q8NHL6 650 aaPredicted RBP12.84□□□□□ -0.35
ERCC1-203ENST00000340192 ADAMTS16Q8TE57 1224 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 PROX1Q92786 737 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms