RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 SOX18P35713 384 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 OR10A3P58181 314 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 DGCR2P98153 550 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 PLP2Q04941 152 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 GPR176Q14439 515 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 TAZQ16635 292 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 EXOSC6Q5RKV6 272 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 PAPD4Q6PIY7 484 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 SVBPQ8N300 66 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 SUMF2Q8NBJ7 301 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 FAM213BQ8TBF2 198 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 NR4A3Q92570 626 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 SPACA5Q96QH8 159 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 SLC46A2Q9BY10 475 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 KLHL21Q9UJP4 597 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 KLK4Q9Y5K2 254 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 SPTAN1Q13813 2472 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 BET1O15155 118 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 ELK1P19419 428 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 NDUFA6P56556 154 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 MLF1P58340 268 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 HTRA3P83110 453 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 POU3F1Q03052 451 aaPredicted RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 DPPA4Q7L190 304 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 TMEM151BQ8IW70 566 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 ZNF417Q8TAU3 575 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 TXNDC15Q96J42 360 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 MBOAT4Q96T53 435 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 ZFYVE21Q9BQ24 234 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 LIN7BQ9HAP6 207 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 CGGBP1Q9UFW8 167 aaPredicted RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 G3V3Y1 287 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 FXYD1O00168 92 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 NSA2O95478 260 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 EGFP01133 1207 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 CSF1P09603 554 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 ELAVL4P26378 380 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 TMEM35AQ53FP2 167 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 PAN3Q58A45 887 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 PRSS36Q5K4E3 855 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 MANEALQ5VSG8 457 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 NXNL2Q5VZ03 156 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 FAM122CQ6P4D5 195 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 GLB1L2Q8IW92 636 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 CDRT4Q8N9R6 151 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 WFDC5Q8TCV5 224 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 ELP4Q96EB1 424 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 TRIB3Q96RU7 358 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 GSX2Q9BZM3 304 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 NRSN2Q9GZP1 204 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 CHRDQ9H2X0 955 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 RETREG1Q9H6L5 497 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 SIDT1Q9NXL6 827 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 NCDNQ9UBB6 729 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 LCMT2O60294 686 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 AIFM1O95831 613 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 F10P00742 488 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 SERPINE2P07093 398 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 ZNF865P0CJ78 1059 aaPredicted RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 OR13C7P0DN81 318 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 SLC6A11P48066 632 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 RAP2BP61225 183 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 TESK1Q15569 626 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 RAB41Q5JT25 222 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 OR52W1Q6IF63 320 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 MRPL41Q8IXM3 137 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 PM20D2Q8IYS1 436 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 LRRC18Q8N456 261 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 OR51S1Q8NGJ8 323 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 OR6F1Q8NGZ6 308 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 OR1S1Q8NH92 325 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 C22orf15Q8WYQ4 148 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 DAZLQ92904 295 aaKnown RBP8.08□□□□□ -1.12
RTN3-202ENST00000339997 ZNF160Q9HCG1 818 aa8.08□□□□□ -1.12
RTN3-202ENST00000339997 A0A1W2PS29 197 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 WASH4PA8MWX3 477 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 SLC16A6O15403 523 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 SNCGO76070 127 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 RGS11O94810 467 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 ALX3O95076 343 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 SNAPINO95295 136 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 CX3CR1P49238 355 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 RPS15AP62244 130 aaKnown RBP8.07□□□□□ -1.12
RTN3-202ENST00000339997 SIRPAP78324 504 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 GPLD1P80108 840 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 GLO1Q04760 184 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 GPR18Q14330 331 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 LPAL2Q16609 132 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 KDM4DQ6B0I6 523 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 SULF2Q8IWU5 870 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 WDSUB1Q8N9V3 476 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 OR51Q1Q8NH59 317 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 ST8SIA4Q92187 359 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 ZNF845Q96IR2 970 aaPredicted RBP8.07□□□□□ -1.12
RTN3-202ENST00000339997 PELOQ9BRX2 385 aaKnown RBP8.07□□□□□ -1.12
RTN3-202ENST00000339997 RNF186Q9NXI6 227 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 CCL26Q9Y258 94 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 ATG4BQ9Y4P1 393 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 KIAA1551Q9HCM1 1747 aa8.07□□□□□ -1.12
RTN3-202ENST00000339997 GGT3PA6NGU5 568 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms