RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 ACTC1P68032 377 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 ACTA1P68133 377 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 TGM3Q08188 693 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 TMEM115Q12893 351 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-201ENST00000339754 ILF3Q12906 894 aaKnown RBP eCLIP8.64□□□□□ -1.03
NECAP1-201ENST00000339754 RPL22L1Q6P5R6 122 aaKnown RBP8.64□□□□□ -1.03
NECAP1-201ENST00000339754 FIP1L1Q6UN15 594 aaKnown RBP8.64□□□□□ -1.03
NECAP1-201ENST00000339754 BEST3Q8N1M1 668 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 C2orf73Q8N5S3 287 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-201ENST00000339754 CYB561A3Q8NBI2 242 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 OR52L1Q8NGH7 329 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 OR51S1Q8NGJ8 323 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 SLC2A12Q8TD20 617 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 ARMC5Q96C12 935 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 OR7D2Q96RA2 312 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 SLC22A12Q96S37 553 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 CD180Q99467 661 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 PAPOLGQ9BWT3 736 aaKnown RBP8.64□□□□□ -1.03
NECAP1-201ENST00000339754 SEC11CQ9BY50 192 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 EGLN1Q9GZT9 426 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 ALX4Q9H161 411 aaPredicted RBP8.64□□□□□ -1.03
NECAP1-201ENST00000339754 ZDHHC6Q9H6R6 413 aa8.64□□□□□ -1.03
NECAP1-201ENST00000339754 A0A1W2PQ45 241 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-201ENST00000339754 A0A1W2PQY0 241 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 LRIT2A6NDA9 550 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 ACOD1A6NK06 481 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 TMEM127O75204 238 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PRKRAO75569 313 aaKnown RBP8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PPP1R3DO95685 299 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 INHAP05111 366 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 CALCBP10092 127 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PRF1P14222 555 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 ITPKBP27987 946 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PRKAR1BP31321 381 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 CSF2RBP32927 897 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 FAUP35544 74 aaKnown RBP8.63□□□□□ -1.03
NECAP1-201ENST00000339754 RAB5BP61020 215 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 DUSP2Q05923 314 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 SRSF4Q08170 494 aaKnown RBP8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PLA2G7Q13093 441 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 CRMP1Q14194 572 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 ZNF750Q32MQ0 723 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 NDUFAF6Q330K2 333 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PLEKHN1Q494U1 663 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-201ENST00000339754 C4orf46Q504U0 113 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 C11orf87Q6NUJ2 197 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 TMEM64Q6YI46 380 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 WDR88Q6ZMY6 472 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 TAS1R1Q7RTX1 841 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 KRT77Q7Z794 578 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 TRAM1L1Q8N609 369 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 OR4A4PQ8NGN8 299 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 C2orf15Q8WU43 125 aaKnown RBP8.63□□□□□ -1.03
NECAP1-201ENST00000339754 LINC01599Q8WXQ3 324 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PHYHIPQ92561 330 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 IL17FQ96PD4 163 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 STARD7Q9NQZ5 370 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 SLC35A3Q9Y2D2 325 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 A0A1B0GTI1 187 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 IMPA2O14732 288 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 EOMESO95936 686 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 CKMP06732 381 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 ZNF44P15621 663 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 MPIP34949 423 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 SSTP61278 116 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 EIF2S3LQ2VIR3 472 aaKnown RBP8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PRAMEF14Q5SWL7 426 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 RAB12Q6IQ22 244 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PRSS55Q6UWB4 352 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-201ENST00000339754 NAA40Q86UY6 237 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 SYS1Q8N2H4 156 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PFN4Q8NHR9 129 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 C15orf40Q8WUR7 153 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 ZNF689Q96CS4 500 aaPredicted RBP8.63□□□□□ -1.03
NECAP1-201ENST00000339754 CNTNAP3BQ96NU0 1288 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 BBS4Q96RK4 519 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 TMEM100Q9NV29 134 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 KLHL28Q9NXS3 571 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 GHRLQ9UBU3 117 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 LRFN2Q9ULH4 789 aa8.63□□□□□ -1.03
NECAP1-201ENST00000339754 PLXNA2O75051 1894 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 MDC1Q14676 2089 aaKnown RBP8.62□□□□□ -1.03
NECAP1-201ENST00000339754 FEZF1A0PJY2 475 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 GLOD5A6NK44 160 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 PPM1DO15297 605 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 ANXA2P07355 339 aaKnown RBP8.62□□□□□ -1.03
NECAP1-201ENST00000339754 EDNRAP25101 427 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 PSMB10P40306 273 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 ANXA11P50995 505 aaKnown RBP8.62□□□□□ -1.03
NECAP1-201ENST00000339754 ZNF136P52737 540 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 SMCO1Q147U7 214 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 PEA15Q15121 130 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 MRM1Q6IN84 353 aaKnown RBP8.62□□□□□ -1.03
NECAP1-201ENST00000339754 Q6ZNB5 142 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 ACOT7LQ6ZUV0 252 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 NUDT13Q86X67 352 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 DND1Q8IYX4 353 aaKnown RBP8.62□□□□□ -1.03
NECAP1-201ENST00000339754 SDR9C7Q8NEX9 313 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 OR1J4Q8NGS1 313 aa8.62□□□□□ -1.03
NECAP1-201ENST00000339754 MNTQ99583 582 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms