RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 SPATA9Q9BWV2 254 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 AMBRA1Q9C0C7 1298 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 SDR39U1Q9NRG7 319 aaPredicted RBP17.01■□□□□ 0.31
ITGA4-202ENST00000339307 RPS6KB2Q9UBS0 482 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 IFT52Q9Y366 437 aa17.01■□□□□ 0.31
ITGA4-202ENST00000339307 HEATR1Q9H583 2144 aaKnown RBP17.01■□□□□ 0.31
ITGA4-202ENST00000339307 ALPK2Q86TB3 2170 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 DSPPQ9NZW4 1301 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 A8MV72 311 aaPredicted RBP17■□□□□ 0.31
ITGA4-202ENST00000339307 ZNF587BE7ETH6 402 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 FRS3O43559 492 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 AHSA1O95433 338 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 LGI1O95970 557 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 SELENOPP49908 381 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 IL1RL1Q01638 556 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 ZSWIM7Q19AV6 140 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 SLC2A7Q6PXP3 512 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 CXXC5Q7LFL8 322 aaKnown RBP17■□□□□ 0.31
ITGA4-202ENST00000339307 MAVSQ7Z434 540 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 MAL2Q969L2 176 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 PCDHB14Q9Y5E9 798 aa17■□□□□ 0.31
ITGA4-202ENST00000339307 CLIC1O00299 241 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 VAMP5O95183 116 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 IFNA2P01563 188 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 NUDT7P0C024 238 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 RPS5P46782 204 aaKnown RBP16.99■□□□□ 0.31
ITGA4-202ENST00000339307 STX1BP61266 288 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 MSANTD1Q6ZTZ1 278 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 CREB3L2Q70SY1 520 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 KDM8Q8N371 416 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 OR10H5Q8NGA6 315 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 RNF217Q8TC41 542 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 C3orf49Q96BT1 292 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 ALKBH3Q96Q83 286 aaPredicted RBP16.99■□□□□ 0.31
ITGA4-202ENST00000339307 RAD21L1Q9H4I0 556 aa16.99■□□□□ 0.31
ITGA4-202ENST00000339307 A0A096LPE4 126 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 A0A096LPI6 279 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 A0A1W2PPZ6 126 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 ELOA3DA6NLF2 546 aaPredicted RBP16.98■□□□□ 0.31
ITGA4-202ENST00000339307 H7C417 338 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 LY6HO94772 140 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 TUBA1BP68363 451 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 TUBA4AP68366 448 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 RGNQ15493 299 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 CARTPTQ16568 116 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 ELOA3BQ3SY89 546 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 TBRG1Q3YBR2 411 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 CHRFAM7AQ494W8 412 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 TUBA1AQ71U36 451 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 ELOA3Q8NG57 546 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 OR1K1Q8NGR3 316 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 TNFRSF13CQ96RJ3 184 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 RASD1Q9Y272 281 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 USH1CQ9Y6N9 552 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 ABCA1O95477 2261 aa16.98■□□□□ 0.31
ITGA4-202ENST00000339307 NR5A2O00482 541 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 EFNA4P52798 201 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 CLDN17P56750 224 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 C1DQ13901 141 aaKnown RBP16.97■□□□□ 0.31
ITGA4-202ENST00000339307 TMEM249Q2WGJ8 235 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 PODNL1Q6PEZ8 512 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 VHLLQ6RSH7 139 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 HIPK1Q86Z02 1210 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 BBS10Q8TAM1 723 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 STK35Q8TDR2 534 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 GTF2H4Q92759 462 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 SLC38A2Q96QD8 506 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 VRK1Q99986 396 aaPredicted RBP16.97■□□□□ 0.31
ITGA4-202ENST00000339307 PIF1Q9H611 641 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 PRDM4Q9UKN5 801 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 CHST2Q9Y4C5 530 aa16.97■□□□□ 0.31
ITGA4-202ENST00000339307 SONP18583 2426 aaKnown RBP16.97■□□□□ 0.31
ITGA4-202ENST00000339307 IGHV1-18A0A0C4DH31 117 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 UPK3AO75631 287 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 PNMTP11086 282 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 SLC25A16P16260 332 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 ZNF43P17038 809 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 SNRPD2P62316 118 aaKnown RBP16.96■□□□□ 0.31
ITGA4-202ENST00000339307 EPHX4Q8IUS5 362 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 MFSD8Q8NHS3 518 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 KCNK17Q96T54 332 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 PAIP1Q9H074 479 aaKnown RBP16.96■□□□□ 0.31
ITGA4-202ENST00000339307 A4GALTQ9NPC4 353 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 OBP2BQ9NPH6 170 aa16.96■□□□□ 0.31
ITGA4-202ENST00000339307 OR6C65A6NJZ3 312 aa16.96■□□□□ 0.3
ITGA4-202ENST00000339307 POLR3GO15318 223 aaPredicted RBP16.96■□□□□ 0.3
ITGA4-202ENST00000339307 CRYAAP02489 173 aa16.96■□□□□ 0.3
ITGA4-202ENST00000339307 CBLP22681 906 aa16.96■□□□□ 0.3
ITGA4-202ENST00000339307 P2RY4P51582 365 aa16.96■□□□□ 0.3
ITGA4-202ENST00000339307 ROR2Q01974 943 aaKnown RBP16.96■□□□□ 0.3
ITGA4-202ENST00000339307 C6orf52Q5T4I8 152 aa16.96■□□□□ 0.3
ITGA4-202ENST00000339307 EPGNQ6UW88 154 aa16.96■□□□□ 0.3
ITGA4-202ENST00000339307 SLC46A3Q7Z3Q1 461 aa16.96■□□□□ 0.3
ITGA4-202ENST00000339307 NFKBIDQ8NI38 313 aa16.96■□□□□ 0.3
ITGA4-202ENST00000339307 KTI12Q96EK9 354 aaPredicted RBP16.96■□□□□ 0.3
ITGA4-202ENST00000339307 REPIN1Q9BWE0 567 aaKnown RBP16.96■□□□□ 0.3
ITGA4-202ENST00000339307 INTS9Q9NV88 658 aaKnown RBP16.96■□□□□ 0.3
ITGA4-202ENST00000339307 FKBP7Q9Y680 259 aa16.96■□□□□ 0.3
ITGA4-202ENST00000339307 DNHD1Q96M86 4753 aa16.95■□□□□ 0.3
ITGA4-202ENST00000339307 PLCE1Q9P212 2302 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms