RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 GIPRP48546 466 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 CDC42P60953 191 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 LTBQ06643 244 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 PMS2P3Q13401 168 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 FHL1Q13642 323 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 PLEKHN1Q494U1 663 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 USP51Q70EK9 711 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 H1FNTQ75WM6 255 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 GGNQ86UU5 652 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 C8orf59Q8N0T1 100 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 DEPDC4Q8N2C3 294 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 SMPDL3BQ92485 455 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 ZHX1-C8orf76Q96EF9 292 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 TNFRSF13CQ96RJ3 184 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 GPX7Q96SL4 187 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 MFRPQ9BY79 579 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 EXO5Q9H790 373 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 CHST11Q9NPF2 352 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 TIGARQ9NQ88 270 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 PAQR5Q9NXK6 330 aaPredicted RBP13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 LRCH1Q9Y2L9 728 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 SLC6A5Q9Y345 797 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 HSPE1-MOB4S4R3N1 261 aa13.06□□□□□ -0.32
NIPAL3-202ENST00000339255 M0R082 166 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 OR6A2O95222 327 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 IMPDH2P12268 514 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 MYF6P23409 242 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 LHX2P50458 406 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 FXYD6P3P58550 94 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 RAC3P60763 192 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 CDK5Q00535 292 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 MED21Q13503 144 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 SLX4IPQ5VYV7 408 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 VASNQ6EMK4 673 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 PAQR6Q6TCH4 344 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 FAM180AQ6UWF9 173 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 CASP12Q6UXS9 341 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 DPY19L2P2Q6ZN68 376 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 TRILQ7L0X0 811 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 MEIOBQ8N635 442 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 OR8D4Q8NGM9 314 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 ZNF417Q8TAU3 575 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 ABTB1Q969K4 478 aaPredicted RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 SAMD8Q96LT4 415 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 SLC38A2Q96QD8 506 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 TAAR6Q96RI8 345 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 ZNF587Q96SQ5 575 aaPredicted RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 TSSK6Q9BXA6 273 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 PLA2G12AQ9BZM1 189 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 PLSCR2Q9NRY7 297 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 IMPAD1Q9NX62 359 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 BOD1L1Q8NFC6 3051 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 A0A1B0GVC2 190 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 A0A1W2PNR3 127 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 A0A1W2PNV4 684 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 BLOC1S5-TXNDC5H3BN57 136 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 EIF1AYO14602 144 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 IDH3BO43837 385 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 MPZL2O60487 215 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 HMGN1P05114 100 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 GNAO1P09471 354 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 APEHP13798 732 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 ZNF708P17019 499 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 RPL4P36578 427 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 TPD52P55327 224 aaPredicted RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 CLDN20P56880 219 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 OR2B6P58173 313 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 RPL18Q07020 188 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 PUDPQ08623 228 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 GINS1Q14691 196 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 ZNF239Q16600 458 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 CTU2Q2VPK5 515 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 ALG10Q5BKT4 473 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 ZNF691Q5VV52 312 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 HBMQ6B0K9 141 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 SIAH3Q8IW03 269 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 CHERPQ8IWX8 916 aaKnown RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 LNX2Q8N448 690 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 OR2V1Q8NHB1 315 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 IFT27Q9BW83 186 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 DEFB127Q9H1M4 99 aa13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 ZNF71Q9NQZ8 489 aaPredicted RBP13.05□□□□□ -0.32
NIPAL3-202ENST00000339255 GTF3C1Q12789 2109 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 USP24Q9UPU5 2620 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 A0A0J9YW62 118 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 ERVH48-1M5A8F1 160 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 PLPP3O14495 311 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 BHLHE40O14503 412 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 ARPC3O15145 178 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 SEC14L5O43304 696 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 OPN1LWP04000 364 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 ADORA3P0DMS8 318 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 CPN1P15169 458 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 CLDN18P56856 261 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 RPS3AP61247 264 aaKnown RBP13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 H3F3AP84243 136 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 ZP4Q12836 540 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 PGGHGQ32M88 737 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 NADK2Q4G0N4 442 aa13.04□□□□□ -0.32
NIPAL3-202ENST00000339255 CLEC12AQ5QGZ9 265 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms