RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 MRPS10P82664 201 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SMAD2Q15796 467 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 FIP1L1Q6UN15 594 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 KIRREL2Q6UWL6 708 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 DPY19L4Q7Z388 723 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PIAS4Q8N2W9 510 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SLC25A44Q96H78 314 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 OPALINQ96PE5 141 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 CCNL2Q96S94 520 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 MRI1Q9BV20 369 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 CHMP1AQ9HD42 196 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PCYT1BQ9Y5K3 369 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 TRDV1A0A1B0GX56 115 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 KDM4BO94953 1096 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 CCNOP22674 350 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 TFF2Q03403 129 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 BTN2A1Q7KYR7 527 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 UEVLDQ8IX04 471 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PLA2G12AQ9BZM1 189 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 HPF1Q9NWY4 346 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SLC39A1Q9NY26 324 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 LILRA5A6NI73 299 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 GSTT2P0CG29 244 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM244Q5VVB8 128 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 CDH24Q86UP0 819 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 EGFL6Q8IUX8 553 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 FAM83FQ8NEG4 500 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 YIPF6Q96EC8 236 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SYT4Q9H2B2 425 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 RYDENQ9NUL5 291 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 ACOD1A6NK06 481 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 H0YIG0 161 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 RAD1O60671 282 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 GXYLT1Q4G148 440 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SERPINA12Q8IW75 414 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PM20D2Q8IYS1 436 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 POTEKPQ9BYX7 375 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 DOCK4Q8N1I0 1966 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 MEGF11A6BM72 1044 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 EIF4E2O60573 245 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 GCM2O75603 506 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PRSS3P35030 304 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 FOLR3P41439 243 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 HTR3AP46098 478 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 STARP49675 285 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 GALK2Q01415 458 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 C12orf73Q69YU5 71 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 TMED4Q7Z7H5 227 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 KCTD12Q96CX2 325 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 CLCC1Q96S66 551 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 ARHGDIGQ99819 225 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PAQR5Q9NXK6 330 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 IGHV1OR15-9A0A0B4J2B8 117 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 IDSB3KWA1 339 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF878C9JN71 531 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 FNTBP49356 437 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SF3A2Q15428 464 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 Q499Y3 187 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 OLFML2AQ68BL7 652 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 TSSK4Q6SA08 328 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 TIGD4Q8IY51 512 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 OR4C3Q8NH37 302 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 NAA11Q9BSU3 229 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 NCDNQ9UBB6 729 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 MDC1Q14676 2089 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 NCR1O76036 304 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 NKX2-5P52952 324 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 MVDP53602 400 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PSPHP78330 225 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PRAMEF20Q5VT98 475 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 ARMC10Q8N2F6 343 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 TMEM99Q8N816 258 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 CCDC107Q8WV48 283 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 RBM24Q9BX46 236 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 IL20Q9NYY1 176 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 YARS2Q9Y2Z4 477 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 THADAQ6YHU6 1953 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 LMO7DNF2Z398 122 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 OR7A10O76100 309 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 P2RX1P51575 399 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SMCO1Q147U7 214 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 ABHD4Q8TB40 342 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SLC25A18Q9H1K4 315 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 RNF215Q9Y6U7 377 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 MEIOCA2RUB1 952 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 KDM4EB2RXH2 506 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 HIST1H1CP16403 213 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 FCARP24071 287 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 TPBGQ13641 420 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 ZNF704Q6ZNC4 412 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 OR4N2Q8NGD1 307 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 FBXO34Q9NWN3 711 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 LOC100509620A0A075B734 347 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 NSG1A0A0A6YYJ2 146 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SYT7O43581 403 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 CELA2BP08218 269 aaPredicted RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SNRPBP14678 240 aaKnown RBP5.79□□□□□ -1.48
PRKDC-202ENST00000338368 PGAM2P15259 253 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SLC35D3Q5M8T2 416 aa5.79□□□□□ -1.48
PRKDC-202ENST00000338368 SIMC1Q8NDZ2 872 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms