RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 HENMT1Q5T8I9 393 aaKnown RBP12.29□□□□□ -0.44
COL2A1-201ENST00000337299 SLCO4C1Q6ZQN7 724 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 OR4K14Q8NGD5 310 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 TMEM106AQ96A25 262 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 GPR137Q96N19 417 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 RTP3Q9BQQ7 232 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 PIGQQ9BRB3 760 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 PHPT1Q9NRX4 125 aaPredicted RBP12.29□□□□□ -0.44
COL2A1-201ENST00000337299 LHX3Q9UBR4 397 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 OR5H14A6NHG9 310 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 KAT7O95251 611 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 PEX11BO96011 259 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 PRNPP04156 253 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 S1PR1P21453 382 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 WNT3P56703 355 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 TIAL1Q01085 375 aaKnown RBP eCLIP12.29□□□□□ -0.44
COL2A1-201ENST00000337299 CA5BP1Q8WTZ4 195 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 OR1F2PQ96R84 312 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 TNFRSF13CQ96RJ3 184 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 POFUT1Q9H488 388 aa12.29□□□□□ -0.44
COL2A1-201ENST00000337299 PURGQ9UJV8 347 aaKnown RBP12.29□□□□□ -0.44
COL2A1-201ENST00000337299 TRBV23-1A0A0A0MS06 115 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 A0A1B0GUH1 482 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 TMEM72A0PK05 275 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 ATF1P18846 271 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 CR2P20023 1033 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 ZFP36L2P47974 494 aaKnown RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 GAREM2Q75VX8 874 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 PXKQ7Z7A4 578 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 LRRTM4Q86VH4 590 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 CHTF18Q8WVB6 975 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 PDXPQ96GD0 296 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 ULBP3Q9BZM4 244 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 SEC61A2Q9H9S3 476 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 SLC22A23A1A5C7 686 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 CCDC85CA6NKD9 419 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 F12P00748 615 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 IFNA10P01566 189 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 IFNA4P05014 189 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 SRMP19623 302 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 CNR1P21554 472 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 ITGB7P26010 798 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 VASPP50552 380 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 IDH3GP51553 393 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 BAMBIQ13145 260 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 SAMD14Q8IZD0 417 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 AVL9Q8NBF6 648 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 GPR148Q8TDV2 347 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 SFT2D1Q8WV19 159 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 MOAP1Q96BY2 351 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 OR7D2Q96RA2 312 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 PBDC1Q9BVG4 233 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 SLC25A32Q9H2D1 315 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 MTHFD2LQ9H903 347 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 FITM1A5D6W6 292 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 ERCC1P07992 297 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 AMY2BP19961 511 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 FGF9P31371 208 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 TAS2R19P59542 299 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 LSM11P83369 360 aaKnown RBP eCLIP12.28□□□□□ -0.444e-8■■■■□ 19.8
COL2A1-201ENST00000337299 SPOCK1Q08629 439 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 TAS1R1Q7RTX1 841 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 GRASPQ7Z6J2 395 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 NRROSQ86YC3 692 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 KCNRGQ8N5I3 272 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 NEURL3Q96EH8 262 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 RSRP1Q9BUV0 290 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 IL36AQ9UHA7 158 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 FAM96BQ9Y3D0 163 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 SCN7AQ01118 1682 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 NHSQ6T4R5 1651 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 TUBAL3A6NHL2 446 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 EFCAB7A8K855 629 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 NDUFB2O95178 105 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 CTXN1P60606 82 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 FOXK2Q01167 660 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 MANEAQ5SRI9 462 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 CLEC9AQ6UXN8 241 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 C12orf76Q8N812 135 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 ZNF511Q8NB15 262 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 PTP4A1Q93096 173 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 WNT2BQ93097 391 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 SCGB3A2Q96PL1 93 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 TEAD3Q99594 435 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 NKX3-1Q99801 234 aaPredicted RBP12.28□□□□□ -0.44
COL2A1-201ENST00000337299 TUBG2Q9NRH3 451 aa12.28□□□□□ -0.44
COL2A1-201ENST00000337299 ZNFX1Q9P2E3 1918 aaKnown RBP12.27□□□□□ -0.44
COL2A1-201ENST00000337299 C1orf226A1L170 272 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 CSTAP01040 98 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 KLKB1P03952 638 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 CLUP10909 449 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 ENPP1P22413 925 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 G0S2P27469 103 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 MAGEB1P43366 347 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 MELKQ14680 651 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 C3orf33Q6P1S2 294 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 SEZ6L2Q6UXD5 910 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 SIRT6Q8N6T7 355 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 FRMD1Q8N878 549 aa12.27□□□□□ -0.44
COL2A1-201ENST00000337299 FN3KRPQ9HA64 309 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms