RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 GALNT9Q9HCQ5 603 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 A0A087WUJ7 227 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 IRGMA1A4Y4 181 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 B4DXG7 233 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 LMO7DNF2Z398 122 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 ZNF217O75362 1048 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 AK1P00568 194 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 IGLV3-19P01714 112 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 FREM3P0C091 2139 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 FBXO45P0C2W1 286 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 HNRNPKP61978 463 aaKnown RBP eCLIP8.07□□□□□ -1.12
SNCA-201ENST00000336904 FUT7Q11130 342 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 ETFDHQ16134 617 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 MEP1BQ16820 701 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 MANEAQ5SRI9 462 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 SFXN4Q6P4A7 337 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 ZCCHC12Q6PEW1 402 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 METAP1DQ6UB28 335 aaPredicted RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 NCCRP1Q6ZVX7 275 aaPredicted RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 UBQLNLQ8IYU4 475 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 THAP4Q8WY91 577 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 TAAR8Q969N4 342 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 SLC35B4Q969S0 331 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 TXNDC15Q96J42 360 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 CNN2Q99439 309 aaKnown RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 G6PC3Q9BUM1 346 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 ZNF426Q9BUY5 554 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 TP63Q9H3D4 680 aaPredicted RBP8.07□□□□□ -1.12
SNCA-201ENST00000336904 KCNK15Q9H427 330 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 BRD7Q9NPI1 651 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 FGF21Q9NSA1 209 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 TMEM5Q9Y2B1 443 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 LOC400499M0QZD8 3231 aa8.07□□□□□ -1.12
SNCA-201ENST00000336904 DYRK3O43781 588 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 IFNGP01579 166 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 HLA-DQA2P01906 255 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 IL12BP29460 328 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 EVX1P49640 407 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 AGFG1P52594 562 aaKnown RBP8.06□□□□□ -1.12
SNCA-201ENST00000336904 NXPH1P58417 271 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 MELKQ14680 651 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 PON3Q15166 354 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 INPP5JQ15735 1006 aaPredicted RBP8.06□□□□□ -1.12
SNCA-201ENST00000336904 ZNF141Q15928 474 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 KLHL26Q53HC5 615 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 ARHGAP11AQ6P4F7 1023 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 XKRXQ6PP77 449 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 ZNF550Q7Z398 422 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 ZNF687Q8N1G0 1237 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 AP3S1Q92572 193 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 UPRTQ96BW1 309 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 ABHD1Q96SE0 405 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 LPAR4Q99677 370 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 TMEM185BQ9H7F4 350 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 IKZF2Q9UKS7 526 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 VDAC3Q9Y277 283 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 CEP192Q8TEP8 1941 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 ARHGEF9O43307 516 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 DDAH2O95865 285 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 KRT8P05787 483 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 GSTT2P0CG29 244 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 GSTT2BP0CG30 244 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 ATF1P18846 271 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 MYL9P24844 172 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 DHPSP49366 369 aaPredicted RBP8.06□□□□□ -1.12
SNCA-201ENST00000336904 RPL18Q07020 188 aaKnown RBP8.06□□□□□ -1.12
SNCA-201ENST00000336904 PLCXD2Q0VAA5 305 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 SKP2Q13309 424 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 SMAD4Q13485 552 aaKnown RBP8.06□□□□□ -1.12
SNCA-201ENST00000336904 ALG10Q5BKT4 473 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 MDGA2Q7Z553 956 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 PM20D2Q8IYS1 436 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 LSMEM1Q8N8F7 131 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 OR51A4Q8NGJ6 313 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 OR5M1Q8NGP8 315 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 OR6N2Q8NGY6 317 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 WDFY2Q96P53 400 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 AMELYQ99218 206 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 VN1R1Q9GZP7 353 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 PPP1R3EQ9H7J1 279 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 APMAPQ9HDC9 416 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 SLC2A4RGQ9NR83 387 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 C14orf105Q9NVL8 296 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 HRH3Q9Y5N1 445 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 N6AMT1Q9Y5N5 214 aa8.06□□□□□ -1.12
SNCA-201ENST00000336904 FAM240BA0A1B0GVZ2 78 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 C10orf142B7Z368 130 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ZNF264O43296 627 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 FMO6PO60774 539 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 OR7A10O76100 309 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 FBLP22087 321 aaKnown RBP8.05□□□□□ -1.12
SNCA-201ENST00000336904 GRK6P43250 576 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 HSD17B7P56937 341 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 PPP3R1P63098 170 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 MRPS15P82914 257 aaKnown RBP8.05□□□□□ -1.12
SNCA-201ENST00000336904 FOXK1P85037 733 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 LPAL2Q16609 132 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 LCN1P1Q5VSP4 162 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 FAAP20Q6NZ36 180 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 GUSBP11Q6P575 273 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms