RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ZNF417Q8TAU3 575 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 ZNF587Q96SQ5 575 aaPredicted RBP19.29■□□□□ 0.68
TPM1-204ENST00000334895 TIMP4Q99727 224 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 OR52D1Q9H346 318 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 EXO5Q9H790 373 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 ALKBH4Q9NXW9 302 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 IL20Q9NYY1 176 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 ORC6Q9Y5N6 252 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 CDH10Q9Y6N8 788 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 KIAA1549Q9HCM3 1950 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 SULT2B1O00204 365 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 ZNHIT1O43257 154 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 UQCRC1P31930 480 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 OR2B6P58173 313 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 KLRB1Q12918 225 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 NPRL3Q12980 569 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 BCL2A1Q16548 175 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 C3AR1Q16581 482 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 PRR30Q53SZ7 412 aaPredicted RBP19.29■□□□□ 0.68
TPM1-204ENST00000334895 CLDN22Q8N7P3 220 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 OR2V1Q8NHB1 315 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 MOSPD2Q8NHP6 518 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 FANK1Q8TC84 345 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 ZNF184Q99676 751 aaPredicted RBP19.29■□□□□ 0.68
TPM1-204ENST00000334895 TAPBPLQ9BX59 468 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 SRXN1Q9BYN0 137 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 GRIP2Q9C0E4 1043 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 IL20RAQ9UHF4 553 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 HIF3AQ9Y2N7 669 aa19.29■□□□□ 0.68
TPM1-204ENST00000334895 ZNF814B7Z6K7 855 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 AQP7O14520 342 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 P2RY4P51582 365 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 CRISP1P54107 249 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 NFATC3Q12968 1075 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 CHERPQ8IWX8 916 aaKnown RBP19.28■□□□□ 0.68
TPM1-204ENST00000334895 OR5J2Q8NH18 312 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 OR10D3Q8NH80 312 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 WDYHV1Q96HA8 205 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 SAMD8Q96LT4 415 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 GPR137Q96N19 417 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 ADI1Q9BV57 179 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 MRPL39Q9NYK5 338 aaKnown RBP19.28■□□□□ 0.68
TPM1-204ENST00000334895 TAS2R5Q9NYW4 299 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 CORINQ9Y5Q5 1042 aa19.28■□□□□ 0.68
TPM1-204ENST00000334895 H3BN98 237 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 AKR7A3O95154 331 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 CDH2P19022 906 aaPredicted RBP19.27■□□□□ 0.68
TPM1-204ENST00000334895 POU1F1P28069 291 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 AQP2P41181 271 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 ESRRGP62508 458 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 ADARB1P78563 741 aaKnown RBP19.27■□□□□ 0.68
TPM1-204ENST00000334895 SRYQ05066 204 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 MFSD13AQ14CX5 517 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 SGCBQ16585 318 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 C6orf52Q5T4I8 152 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 HBMQ6B0K9 141 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 SMARCD3Q6STE5 483 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 NANOGNBQ7Z5D8 188 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 FGD2Q7Z6J4 655 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 SCAIQ8N9R8 606 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 LRRC75AQ8NAA5 344 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 SNRNP40Q96DI7 357 aaKnown RBP19.27■□□□□ 0.68
TPM1-204ENST00000334895 ASPNQ9BXN1 380 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 FAM118AQ9NWS6 357 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 KALRNO60229 2985 aa19.27■□□□□ 0.68
TPM1-204ENST00000334895 A0A1B0GTH9 108 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 BLOC1S5-TXNDC5H3BN57 136 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 PLPP3O14495 311 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 CXCL13O43927 109 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 EIF1AXP47813 144 aaKnown RBP19.26■□□□□ 0.67
TPM1-204ENST00000334895 TDGF1P3P51864 188 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 NUP107P57740 925 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 SLC35A1P78382 337 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 H3F3AP84243 136 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 RPL18Q07020 188 aaKnown RBP19.26■□□□□ 0.67
TPM1-204ENST00000334895 PTGES3Q15185 160 aaKnown RBP19.26■□□□□ 0.67
TPM1-204ENST00000334895 TMEM236Q5W0B7 351 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 IQCF1Q8N6M8 205 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 TMEM99Q8N816 258 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 FAR1Q8WVX9 515 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 TFAP2CQ92754 450 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 OSTF1Q92882 214 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 ZNF845Q96IR2 970 aaPredicted RBP19.26■□□□□ 0.67
TPM1-204ENST00000334895 CHST11Q9NPF2 352 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 ENOPH1Q9UHY7 261 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 SVILO95425 2214 aa19.26■□□□□ 0.67
TPM1-204ENST00000334895 ZAR1LA6NP61 321 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 RAMP1O60894 148 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 RCBTB2O95199 551 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 HIST1H2ABP04908 130 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 CPN1P15169 458 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 RAC3P60763 192 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 CSNK2A1P68400 391 aaPredicted RBP19.25■□□□□ 0.67
TPM1-204ENST00000334895 PMS2P3Q13401 168 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 CLEC12AQ5QGZ9 265 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 H1FNTQ75WM6 255 aaPredicted RBP19.25■□□□□ 0.67
TPM1-204ENST00000334895 HIST3H2AQ7L7L0 130 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 IGFN1Q86VF2 1251 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 HIST1H2ACQ93077 130 aa19.25■□□□□ 0.67
TPM1-204ENST00000334895 UCN2Q96RP3 112 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms