RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 SFTPDP35247 375 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 NR4A2P43354 598 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 RPS23P62266 143 aaKnown RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 LSM11P83369 360 aaKnown RBP eCLIP5.56□□□□□ -1.52
USP16-201ENST00000334352 EGR4Q05215 589 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 SYPL1Q16563 259 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 KRT71Q3SY84 523 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 C10orf128Q5T292 105 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 OTUD3Q5T2D3 398 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 FAM69AQ5T7M9 428 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 FAM205BPQ63HN1 556 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PLXDC2Q6UX71 529 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 USP43Q70EL4 1123 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 H1FNTQ75WM6 255 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 SERPINA11Q86U17 422 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 CALHM3Q86XJ0 350 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PIK3C3Q8NEB9 887 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 OR6X1Q8NH79 312 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 OR2W6PQ8NHA6 318 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 TMEM158Q8WZ71 300 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 SH3YL1Q96HL8 342 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 TEX37Q96LM6 180 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 ANKRD27Q96NW4 1050 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PANX1Q96RD7 426 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 CPPED1Q9BRF8 314 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 TAPBPLQ9BX59 468 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 B3GAT2Q9NPZ5 323 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 SLC7A10Q9NS82 523 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 ZNF229Q9UJW7 825 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 MED13LQ71F56 2210 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 IGKV1D-42A0A075B6H8 117 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PPIAL4EA0A075B759 164 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PPIAL4CA0A0B4J2A2 164 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PPIAL4DF5H284 164 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PPIAL4FP0DN26 164 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 CREB1P16220 341 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PCGF2P35227 344 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 FABP6P51161 128 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 CHN2P52757 468 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PPP2R2BQ00005 443 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 SCGB2A2Q13296 93 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 RIN1Q13671 783 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 OCLNQ16625 522 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 REEP3Q6NUK4 255 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 CLEC2AQ6UVW9 174 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 ZCCHC23Q6ZST2 131 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 AAED1Q7RTV5 226 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 MSRB3Q8IXL7 192 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 MUC15Q8N387 334 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 ZNF786Q8N393 782 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 HIPK4Q8NE63 616 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 ZNF563Q8TA94 476 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 TRIM44Q96DX7 344 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 OR2M2Q96R28 347 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PIMREGQ9BSJ6 248 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 CACYBPQ9HB71 228 aaKnown RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 GPR35Q9HC97 309 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PNPOQ9NVS9 261 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 ATPIF1Q9UII2 106 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 ZNF346Q9UL40 294 aaKnown RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 MKLN1Q9UL63 735 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 COL12A1Q99715 3063 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 HRNRQ86YZ3 2850 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 A0A1W2PNR3 127 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 IFNL4K9M1U5 179 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 UBDO15205 165 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 POLR3GO15318 223 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 TRAF3IP2O43734 574 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 UBL3O95164 117 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 LGI1O95970 557 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 TFP02787 698 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 NR2F1P10589 423 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 ZNF14P17017 642 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 ZNF23P17027 643 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 SOAT1P35610 550 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 CDKN2CP42773 168 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 NAAAQ02083 359 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 VEZF1Q14119 521 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 MOGQ16653 247 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PCGF3Q3KNV8 242 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 TBRG1Q3YBR2 411 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 GPAT3Q53EU6 434 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 BEND6Q5SZJ8 279 aaPredicted RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 GCNT6Q5T4J0 391 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 TSPO2Q5TGU0 170 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 HHATQ5VTY9 493 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PATL1Q86TB9 770 aaKnown RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 KRT73Q86Y46 540 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 GATSQ8NAP1 163 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 XAGE5Q8WWM1 108 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 NANOS1Q8WY41 292 aaKnown RBP5.56□□□□□ -1.52
USP16-201ENST00000334352 PERPQ96FX8 193 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 ARL5BQ96KC2 179 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 PCDHB14Q9Y5E9 798 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 USH1CQ9Y6N9 552 aa5.56□□□□□ -1.52
USP16-201ENST00000334352 HIVEP1P15822 2718 aa5.55□□□□□ -1.52
USP16-201ENST00000334352 A8MV72 311 aaPredicted RBP5.55□□□□□ -1.52
USP16-201ENST00000334352 ZNF99A8MXY4 864 aaPredicted RBP5.55□□□□□ -1.52
USP16-201ENST00000334352 MS4A18H0YCH9 400 aa5.55□□□□□ -1.52
USP16-201ENST00000334352 CHP2O43745 196 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms