RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 TRIM48Q8IWZ4 208 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 CPSF7Q8N684 471 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR2M7Q8NG81 312 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ASB17Q8WXJ9 295 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 GNPNAT1Q96EK6 184 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 FBXL17Q9UF56 701 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ASCC3Q8N3C0 2202 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 BCL9O00512 1426 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 TRIP12Q14669 1992 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 UMAD1C9J7I0 102 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 APOC4-APOC2K7ER74 178 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 HOXC11O43248 304 aaPredicted RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 RBP4P02753 201 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 GLAP06280 429 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 UROSP10746 265 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 GZMAP12544 262 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MGMTP16455 207 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ERVFC1-1P60608 527 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MRPS34P82930 218 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MRPL21Q7Z2W9 205 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZFAND4Q86XD8 727 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 FADS6Q8N9I5 356 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 WDR20Q8TBZ3 569 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF599Q96NL3 588 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MRIQ9BWK5 157 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 C1orf198Q9H425 327 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC22A23A1A5C7 686 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MGST1P10620 155 aaKnown RBP5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR1D2P34982 312 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 PREPP48147 710 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 GPRIN3Q6ZVF9 776 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ECHDC2Q86YB7 292 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR10D4PQ8NGN7 298 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR10AG1Q8NH19 301 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF714Q96N38 554 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 WDFY2Q96P53 400 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 SYT15Q9BQS2 421 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF426Q9BUY5 554 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 NRSN2Q9GZP1 204 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 RIOX1Q9H6W3 641 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 OBP2BQ9NPH6 170 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 MMP26Q9NRE1 261 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 INPP5EQ9NRR6 644 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 C1orf123Q9NWV4 160 aa5.69□□□□□ -1.5
CDC42BPA-201ENST00000334218 RCCD1A6NED2 376 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 FAM74A7A6NL05 159 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SRPX2O60687 465 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 PPP1R17O96001 155 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ADRA2AP08913 450 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 AKR1A1P14550 325 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 LPOP22079 712 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 AADACP22760 399 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CPTPQ5TA50 214 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 DESI1Q6ICB0 168 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 MS4A15Q8N5U1 240 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 FAM234BA2RU67 622 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 TMEM8BA6NDV4 472 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CDRT15L2A8MXV6 281 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 QSOX1O00391 747 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 MSCO60682 206 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC2A4P14672 509 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 MALLQ13021 153 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ALKBH6Q3KRA9 238 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CST9Q5W186 159 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR4C11Q6IEV9 310 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR7E24Q6IFN5 339 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 LRRTM1Q86UE6 522 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR5W2Q8NH69 310 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 PHOSPHO2Q8TCD6 241 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 FBXL8Q96CD0 374 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 FAM173AQ9BQD7 235 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 I6L893 689 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GP1BAP07359 652 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GGT1P19440 569 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SMAGPQ0VAQ4 97 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SLC8B1Q6J4K2 584 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.68□□□□□ -1.52e-6■■□□□ 14.3
CDC42BPA-201ENST00000334218 XYLT1Q86Y38 959 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 CISD2Q8N5K1 135 aaKnown RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 SYNPRQ8TBG9 265 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GLYATL1Q969I3 302 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 FUBP3Q96I24 572 aaKnown RBP eCLIP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 HIST1H2AAQ96QV6 131 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 A0A1W2PRF3 423 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 A0A1W2PRM7 423 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GLTPD2A6NH11 291 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 H3BSA7 217 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 RENP00797 406 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 IFNW1P05000 195 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ZNF44P15621 663 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GABRB2P47870 512 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 NKX2-5P52952 324 aaPredicted RBP5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 TOR2AQ5JU69 321 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 GLT8D1Q68CQ7 371 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 Q6ZNX1 250 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 LANCL3Q6ZV70 420 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 OR5AS1Q8N127 324 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ANKRD52Q8NB46 1076 aa5.68□□□□□ -1.5
CDC42BPA-201ENST00000334218 ACY3Q96HD9 319 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms