RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 NCDNQ9UBB6 729 aa13.27□□□□□ -0.29
SNX20-202ENST00000330943 KCNK6Q9Y257 313 aa13.27□□□□□ -0.29
SNX20-202ENST00000330943 OR52A4PA6NMU1 304 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 SELENOFO60613 162 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 MOSPD3O75425 235 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 CXCL10P02778 98 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 RLN2P04090 185 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 TMIGD3P0DMS9 266 aaPredicted RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 GRPRP30550 384 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 SNRPNP63162 240 aaKnown RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 DEFA5Q01523 94 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 TRMT12Q53H54 448 aaKnown RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 DCST2Q5T1A1 773 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 ZNF613Q6PF04 617 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 FIGNL1Q6PIW4 674 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 ADAMTSL4Q6UY14 1074 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 C10orf90Q96M02 699 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 ZNF559Q9BR84 538 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 ZNF350Q9GZX5 532 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 SLC6A15Q9H2J7 730 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 OR1A2Q9Y585 309 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 NOTCH4Q99466 2003 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 A0A087WV48 116 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 ANKRD61A6NGH8 418 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 PRRT4C9JH25 899 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 DNASE2O00115 360 aaPredicted RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 CBX7O95931 251 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 LAG3P18627 525 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 MNX1P50219 401 aaPredicted RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 MRPS10P82664 201 aaKnown RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 ID2Q02363 134 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 IL10RAQ13651 578 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 UBXN2BQ14CS0 331 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 DHCR24Q15392 516 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 STK11Q15831 433 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 NDUFAF6Q330K2 333 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 C11orf88Q6PI97 169 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 ZNF614Q8N883 585 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 OR2L3Q8NG85 312 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 NPAS1Q99742 590 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 TSPAN10Q9H1Z9 355 aaPredicted RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 TMEM138Q9NPI0 162 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 SPHK1Q9NYA1 384 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 GPRIN2O60269 458 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 FGF18O76093 207 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 RAB40ALP0C0E4 278 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 CISD3P0C7P0 127 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 RAB3AP20336 220 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 ARHGDIBP52566 201 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 ART1P52961 327 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 CTAG1AP78358 180 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 PCGF3Q3KNV8 242 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 LILRA6Q6PI73 481 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 OR2L13Q8N349 312 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 POMGNT2Q8NAT1 580 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 CLRN3Q8NCR9 226 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 OR2AK2Q8NG84 335 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 OR52E1Q8NGJ3 308 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 OR6K6Q8NGW6 343 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 OR2L8Q8NGY9 312 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 TNFAIP8L1Q8WVP5 186 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 ZNRF4Q8WWF5 429 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 RAB40AQ8WXH6 277 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 TRIM43Q96BQ3 446 aaPredicted RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 HAVCR1Q96D42 359 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 PTCHD1Q96NR3 888 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 GPR174Q9BXC1 333 aa13.26□□□□□ -0.29
SNX20-202ENST00000330943 SAV1Q9H4B6 383 aaPredicted RBP13.26□□□□□ -0.29
SNX20-202ENST00000330943 FAM74A7A6NL05 159 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 GNB5O14775 395 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 NARSO43776 548 aaKnown RBP13.25□□□□□ -0.29
SNX20-202ENST00000330943 CXCL14O95715 111 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 MECP2P51608 486 aaKnown RBP13.25□□□□□ -0.29
SNX20-202ENST00000330943 RBMS2Q15434 407 aaKnown RBP13.25□□□□□ -0.29
SNX20-202ENST00000330943 TMEM52BQ4KMG9 183 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 FAM74A3Q4VXF1 159 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 COX18Q8N8Q8 333 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 TMIEQ8NEW7 156 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 LRRC46Q96FV0 321 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 HHIPL1Q96JK4 782 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 MFFQ9GZY8 342 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 IL21RQ9HBE5 538 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 TMEM27Q9HBJ8 222 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 ZNF281Q9Y2X9 895 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 CFAP54Q96N23 3096 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 IGLON5A6NGN9 336 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 IMPA2O14732 288 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 LDOC1O95751 146 aaPredicted RBP13.25□□□□□ -0.29
SNX20-202ENST00000330943 HPP00738 406 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 NGFRP08138 427 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 ZNF888P0CJ79 500 aaPredicted RBP13.25□□□□□ -0.29
SNX20-202ENST00000330943 RPS4Y1P22090 263 aaKnown RBP13.25□□□□□ -0.29
SNX20-202ENST00000330943 NANOS3P60323 173 aaKnown RBP13.25□□□□□ -0.29
SNX20-202ENST00000330943 GMFBP60983 142 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 SORDQ00796 357 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 HNRNPA1L2Q32P51 320 aaKnown RBP13.25□□□□□ -0.29
SNX20-202ENST00000330943 SLC36A1Q7Z2H8 476 aa13.25□□□□□ -0.29
SNX20-202ENST00000330943 MUC20Q8N307 709 aaPredicted RBP13.25□□□□□ -0.29
SNX20-202ENST00000330943 EIF4E3Q8N5X7 224 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms