RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 CBX7O95931 251 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 ACP2P11117 423 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 CD27P26842 260 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 PKLRP30613 574 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 ACTBP60709 375 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 ACTG1P63261 375 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 FCRLAQ7L513 359 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 WDSUB1Q8N9V3 476 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 OR7G1Q8NGA0 311 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 OR6T1Q8NGN1 323 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 GCDHQ92947 438 aaPredicted RBP9.43□□□□□ -0.9
CHD3-201ENST00000330494 CNTNAP3BQ96NU0 1288 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 C1GALT1Q9NS00 363 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 CACNG2Q9Y698 323 aa9.43□□□□□ -0.9
CHD3-201ENST00000330494 FAM166BA8MTA8 275 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 ZNF736B4DX44 427 aaPredicted RBP9.42□□□□□ -0.9
CHD3-201ENST00000330494 ARPC5O15511 151 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 CAV2P51636 162 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 RPS25P62851 125 aaKnown RBP9.42□□□□□ -0.9
CHD3-201ENST00000330494 BCL7AQ4VC05 210 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 OTPQ5XKR4 325 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 LILRA2Q8N149 483 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 L3MBTL4Q8NA19 623 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 SMIM3Q9BZL3 60 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 FAM155AB1AL88 458 aaPredicted RBP9.42□□□□□ -0.9
CHD3-201ENST00000330494 DDAH2O95865 285 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 PAHP00439 452 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 HCCSP53701 268 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 ZNF91Q05481 1191 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 ABHD17CQ6PCB6 329 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 FUNDC1Q8IVP5 155 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 LILRB2Q8N423 598 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 MZB1Q8WU39 189 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 SLC41A2Q96JW4 573 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 CD300AQ9UGN4 299 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 EMC9Q9Y3B6 208 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 LOC102725191A0A1B0GVB3 256 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 A6NHS1 94 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 UPK1BO75841 260 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 FGL1Q08830 312 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 GK2Q14410 553 aaPredicted RBP9.42□□□□□ -0.9
CHD3-201ENST00000330494 ZNF585AQ6P3V2 769 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 C1QTNF6Q9BXI9 259 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 PDFQ9HBH1 243 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 HHATLQ9HCP6 504 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 SLC6A5Q9Y345 797 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 A0A1B0GWA3 101 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 SLC22A5O76082 557 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 GIFP27352 417 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 EPHA5P54756 1037 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 LTBQ06643 244 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 EXOSC6Q5RKV6 272 aaKnown RBP9.42□□□□□ -0.9
CHD3-201ENST00000330494 SLC48A1Q6P1K1 146 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 GDF7Q7Z4P5 450 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 ZNF417Q8TAU3 575 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 FAM234AQ9H0X4 552 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 CDHR4A6H8M9 788 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 PTTG1O95997 202 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 TFP02787 698 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 FCGR2AP12318 317 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 SNRPBP14678 240 aaKnown RBP9.42□□□□□ -0.9
CHD3-201ENST00000330494 DPP4P27487 766 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 CD1CP29017 333 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 ALDH3B1P43353 468 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 VEGFCP49767 419 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 CARD18P57730 90 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 DUSP5Q16690 384 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 BEX5Q5H9J7 111 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 NHSL2Q5HYW2 709 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 GLB1L2Q8IW92 636 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 CHPT1Q8WUD6 406 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 THOC3Q96J01 351 aaKnown RBP9.42□□□□□ -0.9
CHD3-201ENST00000330494 ALG12Q9BV10 488 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 CCDC32Q9BV29 185 aa9.42□□□□□ -0.9
CHD3-201ENST00000330494 IGHV3-64DA0A0J9YX35 117 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 SELENOFO60613 162 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 NXPH3O95157 252 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 HNRNPFP52597 415 aaKnown RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 HNF4GQ14541 408 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 FBXW12Q6X9E4 464 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 AAED1Q7RTV5 226 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 ELP4Q96EB1 424 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 ZNF578Q96N58 590 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 PHF7Q9BWX1 381 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 ZDHHC5Q9C0B5 715 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 SEMA4GQ9NTN9 838 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 BABAM2Q9NXR7 383 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 TMEM184BQ9Y519 407 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 GALR3O60755 368 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 ALDOBP05062 364 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 ELAVL4P26378 380 aaKnown RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 TSPAN31Q12999 210 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 GLYR1Q49A26 553 aaPredicted RBP9.41□□□□□ -0.9
CHD3-201ENST00000330494 MBOAT2Q6ZWT7 520 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 FAM109AQ8N4B1 249 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 EMC6Q9BV81 110 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 KIR3DX1Q9H7L2 352 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 APMAPQ9HDC9 416 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 DYNLRB1Q9NP97 96 aa9.41□□□□□ -0.9
CHD3-201ENST00000330494 FAM86C1Q9NVL1 165 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms