RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 UCHL1P09936 223 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 ALAS2P22557 587 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 RORAP35398 523 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 CDKN2AP42771 156 aaKnown RBP13.28□□□□□ -0.28
TPM3-206ENST00000330188 PITPNBP48739 271 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 EPHA4P54764 986 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 NXPH1P58417 271 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 LINC01590Q5TEZ4 76 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 LEG1Q6P5S2 330 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 GPR135Q8IZ08 494 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 CADM4Q8NFZ8 388 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 ZNF721Q8TF20 911 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 ADIPOR1Q96A54 375 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 LCORQ96JN0 433 aaPredicted RBP13.28□□□□□ -0.28
TPM3-206ENST00000330188 OR1F2PQ96R84 312 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.28□□□□□ -0.28
TPM3-206ENST00000330188 HDHD2Q9H0R4 259 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 ZCCHC4Q9H5U6 513 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 MMP25Q9NPA2 562 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 ALG5Q9Y673 324 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 TP53BP1Q12888 1972 aaPredicted RBP13.28□□□□□ -0.28
TPM3-206ENST00000330188 CEP192Q8TEP8 1941 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 CENPXA8MT69 81 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 NOTOA8MTQ0 251 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 RGS13O14921 159 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 FZD7O75084 574 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 DDAH2O95865 285 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 ATF1P18846 271 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 PSMB10P40306 273 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 EFNA3P52797 238 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 LTBQ06643 244 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 CCDC58Q4VC31 144 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 CEP78Q5JTW2 689 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 SYT9Q86SS6 491 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 OR5H6Q8NGV6 325 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 RPS4Y2Q8TD47 263 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 RFT1Q96AA3 541 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 FYTTD1Q96QD9 318 aaKnown RBP13.28□□□□□ -0.28
TPM3-206ENST00000330188 MARVELD1Q9BSK0 173 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 THAP7Q9BT49 309 aaPredicted RBP13.28□□□□□ -0.28
TPM3-206ENST00000330188 NANSQ9NR45 359 aa13.28□□□□□ -0.28
TPM3-206ENST00000330188 DHCR7Q9UBM7 475 aaKnown RBP13.28□□□□□ -0.28
TPM3-206ENST00000330188 TRIOO75962 3097 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 SERPINI2O75830 405 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 GATBO75879 557 aaKnown RBP13.27□□□□□ -0.28
TPM3-206ENST00000330188 ARL6IP5O75915 188 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 CD14P08571 375 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 ASAH2BP0C7U1 165 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 UQCRC1P31930 480 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 OR1D5P58170 312 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 RPL6Q02878 288 aaKnown RBP13.27□□□□□ -0.28
TPM3-206ENST00000330188 HSF2Q03933 536 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 GPR176Q14439 515 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 PRAMEF17Q5VTA0 474 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 UNQ9370/PRO34162Q6UXP9 181 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 PRR22Q8IZ63 422 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 C10orf53Q8N6V4 93 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 EXD3Q8N9H8 876 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 MVB12AQ96EY5 273 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 MRPL48Q96GC5 212 aaKnown RBP13.27□□□□□ -0.28
TPM3-206ENST00000330188 RNF170Q96K19 258 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 OR14A2Q96R54 314 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 ADOQ96SZ5 270 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 PDCD1LG2Q9BQ51 273 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 ALG12Q9BV10 488 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 RPRD1BQ9NQG5 326 aaKnown RBP13.27□□□□□ -0.28
TPM3-206ENST00000330188 SLC6A5Q9Y345 797 aa13.27□□□□□ -0.28
TPM3-206ENST00000330188 FAM171A2A8MVW0 826 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 PRR32B1ATL7 298 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 IDSB3KWA1 339 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 FLRT2O43155 660 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 ICOSLGO75144 302 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 SLC43A1O75387 559 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 EPXP11678 715 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 APEHP13798 732 aaKnown RBP13.27□□□□□ -0.29
TPM3-206ENST00000330188 AGFG1P52594 562 aaKnown RBP13.27□□□□□ -0.29
TPM3-206ENST00000330188 SLC25A1P53007 311 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 CTXN1P60606 82 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 UBXN2BQ14CS0 331 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 ALG10Q5BKT4 473 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 PYHIN1Q6K0P9 492 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 JAZF1Q86VZ6 243 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 LSM14AQ8ND56 463 aaKnown RBP13.27□□□□□ -0.29
TPM3-206ENST00000330188 OR1L3Q8NH93 324 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 ABHD1Q96SE0 405 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 SMAD5Q99717 465 aaKnown RBP13.27□□□□□ -0.29
TPM3-206ENST00000330188 NUDT9Q9BW91 350 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 BEX2Q9BXY8 128 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 MFRPQ9BY79 579 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 RTN4RQ9BZR6 473 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 PCED1AQ9H1Q7 454 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.29
TPM3-206ENST00000330188 ABRACLQ9P1F3 81 aa13.27□□□□□ -0.29
TPM3-206ENST00000330188 IGHV1OR21-1A0A087WYE8 117 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 A0A0B4J203 849 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 A0A1B0GVT2 93 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 PIAS2O75928 621 aa13.26□□□□□ -0.29
TPM3-206ENST00000330188 SNRPBP14678 240 aaKnown RBP13.26□□□□□ -0.29
TPM3-206ENST00000330188 POU3F3P20264 500 aaPredicted RBP13.26□□□□□ -0.29
TPM3-206ENST00000330188 GRPRP30550 384 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms