RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 AAED1Q7RTV5 226 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 ZIC4Q8N9L1 334 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 ARHGDIGQ99819 225 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 WFDC6Q9BQY6 131 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 TMEM204Q9BSN7 226 aa24.36■■□□□ 1.49
ATPAF1-201ENST00000329231 PRRC2AP48634 2157 aaKnown RBP24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 A0A087WUJ7 227 aa24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 TPST2O60704 377 aa24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 FMO6PO60774 539 aa24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 NRF1Q16656 503 aa24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 SWT1Q5T5J6 900 aaKnown RBP24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 CALHM3Q86XJ0 350 aa24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 GPR32P1Q8NGA4 272 aa24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 RASSF5Q8WWW0 418 aa24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 ZNF385AQ96PM9 386 aaKnown RBP24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 MCHR1Q99705 422 aa24.35■■□□□ 1.49
ATPAF1-201ENST00000329231 TRAV36DV7A0A075B6V5 113 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 OR5H1A6NKK0 313 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 M0R3H8 397 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 RAD51DO75771 328 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 NCMAPQ5T1S8 102 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 OR7E24Q6IFN5 339 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 CCDC80Q76M96 950 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 POU5F2Q8N7G0 328 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 POMGNT2Q8NAT1 580 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 TAAR8Q969N4 342 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 TAMM41Q96BW9 452 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 EPYCQ99645 322 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 CCL19Q99731 98 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 PIP5K1AQ99755 562 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 SLC7A10Q9NS82 523 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 FAM53CQ9NYF3 392 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 RNF115Q9Y4L5 304 aa24.34■■□□□ 1.49
ATPAF1-201ENST00000329231 PRR14LQ5THK1 2151 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 IGKV1D-42A0A075B6H8 117 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 FZD7O75084 574 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 PLAUP00749 431 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 CD3EP07766 207 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 COX4I1P13073 169 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 TSPO2Q5TGU0 170 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 ERICH5Q6P6B1 374 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 ZNF613Q6PF04 617 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 CREB3L2Q70SY1 520 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 MYLK2Q9H1R3 596 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 SLCO5A1Q9H2Y9 848 aa24.33■■□□□ 1.49
ATPAF1-201ENST00000329231 PDLIM1O00151 329 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 AIM2O14862 343 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 ITGA5P08648 1049 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 CD247P20963 164 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 CDH12P55289 794 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 TGFBR3Q03167 851 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 VEZF1Q14119 521 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 MFSD13AQ14CX5 517 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 SEZ6L2Q6UXD5 910 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 PIGWQ7Z7B1 504 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 OR6T1Q8NGN1 323 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 OR6S1Q8NH40 331 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 RCN3Q96D15 328 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 MUS81Q96NY9 551 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 B3GALT5Q9Y2C3 310 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 CELSR1Q9NYQ6 3014 aa24.32■■□□□ 1.48
ATPAF1-201ENST00000329231 HS3ST1O14792 307 aa24.31■■□□□ 1.48
ATPAF1-201ENST00000329231 ABHD12BQ7Z5M8 362 aaPredicted RBP24.31■■□□□ 1.48
ATPAF1-201ENST00000329231 TREML1Q86YW5 311 aa24.31■■□□□ 1.48
ATPAF1-201ENST00000329231 TGIF2LYQ8IUE0 185 aa24.31■■□□□ 1.48
ATPAF1-201ENST00000329231 P3H2Q8IVL5 708 aa24.31■■□□□ 1.48
ATPAF1-201ENST00000329231 C1orf162Q8NEQ5 155 aaPredicted RBP24.31■■□□□ 1.48
ATPAF1-201ENST00000329231 ZNF583Q96ND8 569 aa24.31■■□□□ 1.48
ATPAF1-201ENST00000329231 TMEM43Q9BTV4 400 aa24.31■■□□□ 1.48
ATPAF1-201ENST00000329231 HIVEP1P15822 2718 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 OR6C65A6NJZ3 312 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 M0R082 166 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 CLOCKO15516 846 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 SMPD2O60906 423 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 KRT33AO76009 404 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 ZNF43P17038 809 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 MPGP29372 298 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 GRPRP30550 384 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 FOXG1P55316 489 aaPredicted RBP24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 BSPH1Q075Z2 132 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 NPTX1Q15818 432 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 GABRA6Q16445 453 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 ADAM5Q6NVV9 412 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 H1FNTQ75WM6 255 aaPredicted RBP24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 EPHX4Q8IUS5 362 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 VANGL1Q8TAA9 524 aaPredicted RBP24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 ZNF417Q8TAU3 575 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 AKAP1Q92667 903 aaKnown RBP eCLIP24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 PROX1Q92786 737 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 OXGR1Q96P68 337 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 ZNF587Q96SQ5 575 aaPredicted RBP24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 AMBRA1Q9C0C7 1298 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 ARL2BPQ9Y2Y0 163 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 CORINQ9Y5Q5 1042 aa24.3■■□□□ 1.48
ATPAF1-201ENST00000329231 CHP2O43745 196 aa24.29■■□□□ 1.48
ATPAF1-201ENST00000329231 IFNA14P01570 189 aa24.29■■□□□ 1.48
ATPAF1-201ENST00000329231 ENTPD8Q5MY95 495 aa24.29■■□□□ 1.48
ATPAF1-201ENST00000329231 C9orf135Q5VTT2 229 aa24.29■■□□□ 1.48
ATPAF1-201ENST00000329231 KDM8Q8N371 416 aa24.29■■□□□ 1.48
ATPAF1-201ENST00000329231 C17orf78Q8N4C9 275 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms