RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 OR4C16Q8NGL9 310 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 FOXN4Q96NZ1 517 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF223Q9UK11 482 aaPredicted RBP13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 IKZF2Q9UKS7 526 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 FBXL3Q9UKT7 428 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 GPR34Q9UPC5 381 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 RNF215Q9Y6U7 377 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 TRAV1-2A0A0B4J238 106 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 GXYLT2A0PJZ3 443 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 DUXAA6NLW8 204 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 GABRA3P34903 492 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 CDK3Q00526 305 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 BAMBIQ13145 260 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 SRSF5Q13243 272 aaKnown RBP13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 PON3Q15166 354 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 METRNLQ641Q3 311 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 SEZ6L2Q6UXD5 910 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 OVCH2Q7RTZ1 564 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 CMIPQ8IY22 773 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 LRRC25Q8N386 305 aaPredicted RBP13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 TMEM185AQ8NFB2 350 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF75AQ96N20 296 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 MENTQ9BUN1 341 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 MBNL1Q9NR56 388 aaKnown RBP13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 SLC39A1Q9NY26 324 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 NCDNQ9UBB6 729 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 ADAM29Q9UKF5 820 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 CES1P1Q9UKY3 287 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 LHX6Q9UPM6 363 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 FOXJ3Q9UPW0 622 aa13.13□□□□□ -0.31
CHRNA3-201ENST00000326828 MCIDASD6RGH6 385 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 GSTZ1O43708 216 aaPredicted RBP13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 IFNGP01579 166 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 NGFRP08138 427 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 FGF2P09038 288 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 RAB28P51157 221 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 AKIRIN2Q53H80 203 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 FAM71CQ8NEG0 241 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 OR52E1Q8NGJ3 308 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 Q96M85 177 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF681Q96N22 645 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 PTDSS2Q9BVG9 487 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 PCBD2Q9H0N5 130 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 ZCCHC4Q9H5U6 513 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 TMEM27Q9HBJ8 222 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 CDV3Q9UKY7 258 aaKnown RBP13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 OR2M5A3KFT3 312 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 VEGFDO43915 354 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 RBBP9O75884 186 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 F12P00748 615 aaPredicted RBP13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 LUMP51884 338 aaPredicted RBP13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 GMFBP60983 142 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 DCST2Q5T1A1 773 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 PWWP2BQ6NUJ5 590 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 TSSK4Q6SA08 328 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 NRROSQ86YC3 692 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 GLB1L2Q8IW92 636 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 BPIFCQ8NFQ6 507 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 OR10Z1Q8NGY1 313 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 C2CD4CQ8TF44 421 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 OR8D1Q8WZ84 308 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 MS4A4EQ96PG1 132 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 EXOSC3Q9NQT5 275 aaKnown RBP13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 FBXO4Q9UKT5 387 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 PLCL2Q9UPR0 1127 aa13.12□□□□□ -0.31
CHRNA3-201ENST00000326828 ANKRD20A5PA0PJZ0 165 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 TVP23AA6NH52 213 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 H7C1C5 153 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 DNASE2O00115 360 aaPredicted RBP13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 GPR31O00270 319 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 DOK2O60496 412 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 ADAM11O75078 769 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 EFEMP2O95967 443 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 ANXA2P07355 339 aaKnown RBP13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 APEHP13798 732 aaKnown RBP13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 CPMP14384 443 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 DPP4P27487 766 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 VIPR2P41587 438 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 LCN6P62502 163 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 ACTC1P68032 377 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 ACTA1P68133 377 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 DHCR24Q15392 516 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 TAF13Q15543 124 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 ALG10BQ5I7T1 473 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 ZFP82Q8N141 532 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 CLRN3Q8NCR9 226 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 PXT1Q8NFP0 134 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 OR2AK2Q8NG84 335 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 OR10AC1Q8NH08 325 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 ZNF471Q9BX82 626 aaPredicted RBP13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 INPP5EQ9NRR6 644 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 PLXNA2O75051 1894 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 TRAV18A0A075B6X5 111 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 TBC1D3EA0A087X179 549 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 PRR32B1ATL7 298 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 BLOC1S5-TXNDC5H3BN57 136 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 NDUFB6O95139 128 aa13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 EEF1A1P68104 462 aaKnown RBP13.11□□□□□ -0.31
CHRNA3-201ENST00000326828 SHEQ5VZ18 495 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms