RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 SLC16A7O60669 478 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 CRABP1P29762 137 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 NR0B1P51843 470 aaKnown RBP13.61□□□□□ -0.23
TCOF1-201ENST00000323668 TMEM225Q6GV28 225 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 TMEM184AQ6ZMB5 413 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF793Q6ZN11 406 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF704Q6ZNC4 412 aaPredicted RBP13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ESPNLQ6ZVH7 1005 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 DPY19L4Q7Z388 723 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF546Q86UE3 836 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF547Q8IVP9 402 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 PRR22Q8IZ63 422 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 GTPBP8Q8N3Z3 284 aaPredicted RBP13.61□□□□□ -0.23
TCOF1-201ENST00000323668 SIRT6Q8N6T7 355 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF283Q8N7M2 679 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ZG16BQ96DA0 208 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 ARHGDIGQ99819 225 aa13.61□□□□□ -0.23
TCOF1-201ENST00000323668 EFCAB7A8K855 629 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 CD14P08571 375 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 PET100P0DJ07 73 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 RBMXP38159 391 aaKnown RBP13.6□□□□□ -0.23
TCOF1-201ENST00000323668 TAS2R19P59542 299 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 RAB2AP61019 212 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 CXADRP78310 365 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 BTN1A1Q13410 526 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 EIF2B1Q14232 305 aaKnown RBP13.6□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF628Q5EBL2 1059 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 ARL14Q8N4G2 192 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 OR4K17Q8NGC6 315 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 DUSP19Q8WTR2 217 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 DIO2Q92813 273 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 PHB2Q99623 299 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 METTL7AQ9H8H3 244 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 LYRM4Q9HD34 91 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 QPCTLQ9NXS2 382 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 TBC1D29Q9UFV1 150 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 HHLA2Q9UM44 414 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 LALBAP00709 142 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 PXNP49023 591 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-201ENST00000323668 HCCSP53701 268 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 AGERQ15109 404 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 GSG1LQ6UXU4 331 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 DNAAF1Q8NEP3 725 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 OR52I2Q8NH67 350 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 JSRP1Q96MG2 331 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-201ENST00000323668 PRDM7Q9NQW5 492 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 TBX21Q9UL17 535 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 COPS3Q9UNS2 423 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 PIAS3Q9Y6X2 628 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 TMEM212A6NML5 194 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 OR2T1O43869 369 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 PAPLNO95428 1278 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 VEGFBP49765 207 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 MPEG1Q2M385 716 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 PLEKHN1Q494U1 663 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-201ENST00000323668 GXYLT1Q4G148 440 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 SLC35D3Q5M8T2 416 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 OR13C5Q8NGS8 318 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 SLC25A44Q96H78 314 aaPredicted RBP13.6□□□□□ -0.23
TCOF1-201ENST00000323668 Q96M85 177 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 SELENOFO60613 162 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 HRGP04196 525 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 RNLSQ5VYX0 342 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 TSSK4Q6SA08 328 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 USP53Q70EK8 1073 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 SYS1Q8N2H4 156 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 DEFB119Q8N690 84 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 ASB16Q96NS5 453 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 ACOXLQ9NUZ1 547 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 ETV7Q9Y603 341 aa13.6□□□□□ -0.23
TCOF1-201ENST00000323668 MAGEB4O15481 346 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 SEMG1P04279 462 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 DCNP07585 359 aaKnown RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF806P0C7X5 589 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 LSSP48449 732 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 DYRK1AQ13627 763 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 ALKBH1Q13686 389 aaKnown RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF595Q8IYB9 648 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 SMAP2Q8WU79 429 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 UCN3Q969E3 161 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 ARSGQ96EG1 525 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 MARVELD1Q9BSK0 173 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 C2orf42Q9NWW7 574 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 KRBOX1C9JBD0 128 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 GLCEO94923 617 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 PPP3CBP16298 524 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 HIST1H1CP16403 213 aaKnown RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 INSL4Q14641 139 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 ELP5Q8TE02 316 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 THAP3Q8WTV1 239 aaPredicted RBP13.59□□□□□ -0.23
TCOF1-201ENST00000323668 RASD2Q96D21 266 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 SMIM19Q96E16 107 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 BMFQ96LC9 184 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 H7C1C5 153 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 ZNF264O43296 627 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 SFTPBP07988 381 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 GALP22466 123 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 MVDP53602 400 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 CLRN1P58418 232 aa13.59□□□□□ -0.23
TCOF1-201ENST00000323668 LCN6P62502 163 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms