RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 OR1K1Q8NGR3 316 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 NFKBIDQ8NI38 313 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 NANOS1Q8WY41 292 aaKnown RBP10.78□□□□□ -0.68
TPM3-204ENST00000323144 ADAD1Q96M93 576 aaKnown RBP10.78□□□□□ -0.68
TPM3-204ENST00000323144 SORCS2Q96PQ0 1159 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 TAPBPLQ9BX59 468 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 IKZF5Q9H5V7 419 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 RMND5AQ9H871 391 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 TMBIM4Q9HC24 238 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 A4GALTQ9NPC4 353 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 PCDHB14Q9Y5E9 798 aa10.78□□□□□ -0.68
TPM3-204ENST00000323144 IGKV1D-42A0A075B6H8 117 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 ZNF503-AS2A6NEH8 195 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 ZNF587BE7ETH6 402 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 SEC14L2O76054 403 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 CELA3BP08861 270 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 BMP2P12643 396 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 COPZ1P61923 177 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 LARS2Q15031 903 aaKnown RBP10.77□□□□□ -0.69
TPM3-204ENST00000323144 RGNQ15493 299 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 TMEM249Q2WGJ8 235 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 GLIPR1L2Q4G1C9 344 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 ZNF311Q5JNZ3 666 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 CREB3L2Q70SY1 520 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 EPHX4Q8IUS5 362 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 KDM8Q8N371 416 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 POMGNT2Q8NAT1 580 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 OR10H5Q8NGA6 315 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 BBS10Q8TAM1 723 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 FBXO17Q96EF6 278 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 KTI12Q96EK9 354 aaPredicted RBP10.77□□□□□ -0.69
TPM3-204ENST00000323144 EBF4Q9BQW3 602 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 RHNO1Q9BSD3 238 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 SF3B5Q9BWJ5 86 aaKnown RBP10.77□□□□□ -0.69
TPM3-204ENST00000323144 SLCO1B3Q9NPD5 702 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 PARPBPQ9NWS1 579 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 B3GAT1Q9P2W7 334 aa10.77□□□□□ -0.69
TPM3-204ENST00000323144 A0A096LPE4 126 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 A0A096LPI6 279 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 A0A0G2JPF8 293 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 A0A1W2PPZ6 126 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 HNRNPCL2B2RXH8 293 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 HNRNPCL3B7ZW38 293 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 M0R082 166 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 TLX2O43763 284 aaPredicted RBP10.76□□□□□ -0.69
TPM3-204ENST00000323144 HNRNPCL1O60812 293 aaKnown RBP10.76□□□□□ -0.69
TPM3-204ENST00000323144 FZD7O75084 574 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 CECR9P0C854 216 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 HNRNPCL4P0DMR1 293 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 ARAFP10398 606 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 CALCRP30988 508 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 MAP2K6P52564 334 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 SLC18A1P54219 525 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 CLDN17P56750 224 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 PRPS1P60891 318 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 TGFBR3Q03167 851 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 EPGNQ6UW88 154 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 C6orf89Q6UWU4 347 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 FUNDC1Q8IVP5 155 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 WDFY1Q8IWB7 410 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 ANKS4BQ8N8V4 417 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 ZNF417Q8TAU3 575 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 C10orf105Q8TEF2 133 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 SLC25A36Q96CQ1 311 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 SLC38A2Q96QD8 506 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 ZNF587Q96SQ5 575 aaPredicted RBP10.76□□□□□ -0.69
TPM3-204ENST00000323144 PRR14Q9BWN1 585 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 FKRPQ9H9S5 495 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 CACYBPQ9HB71 228 aaKnown RBP10.76□□□□□ -0.69
TPM3-204ENST00000323144 SLAMF8Q9P0V8 285 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 ATRQ13535 2644 aa10.76□□□□□ -0.69
TPM3-204ENST00000323144 TRBV5-3A0A0A0MS03 114 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 A0A1B0GWA3 101 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 ELOA3DA6NLF2 546 aaPredicted RBP10.75□□□□□ -0.69
TPM3-204ENST00000323144 CLIC1O00299 241 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 POLR3GO15318 223 aaPredicted RBP10.75□□□□□ -0.69
TPM3-204ENST00000323144 TRAF3IP2O43734 574 aaPredicted RBP10.75□□□□□ -0.69
TPM3-204ENST00000323144 TPST1O60507 370 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 KRT33AO76009 404 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 WNT11O96014 354 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 CBLP22681 906 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 GTF2E2P29084 291 aaKnown RBP10.75□□□□□ -0.69
TPM3-204ENST00000323144 AQP1P29972 269 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 STX1BP61266 288 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 ROR2Q01974 943 aaKnown RBP10.75□□□□□ -0.69
TPM3-204ENST00000323144 FADDQ13158 208 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 MST1LQ2TV78 715 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 ELOA3BQ3SY89 546 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 PAGE3Q5JUK9 113 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 BEND6Q5SZJ8 279 aaPredicted RBP10.75□□□□□ -0.69
TPM3-204ENST00000323144 LRIF1Q5T3J3 769 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 GCNT6Q5T4J0 391 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 TMEM225Q6GV28 225 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 DEPDC4Q8N2C3 294 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 GOLGA6L1Q8N7Z2 621 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 ELOA3Q8NG57 546 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 STK35Q8TDR2 534 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 FAM168AQ92567 244 aa10.75□□□□□ -0.69
TPM3-204ENST00000323144 ZNF837Q96EG3 531 aaPredicted RBP10.75□□□□□ -0.69
TPM3-204ENST00000323144 WFDC6Q9BQY6 131 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms