RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 THBS1P07996 1170 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 TMIGD3P0DMS9 266 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-202ENST00000321728 SLC6A6P31641 620 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 FAUP35544 74 aaKnown RBP16.43■□□□□ 0.22
PRKCB-202ENST00000321728 RPL35P42766 123 aaKnown RBP16.43■□□□□ 0.22
PRKCB-202ENST00000321728 MECP2P51608 486 aaKnown RBP16.43■□□□□ 0.22
PRKCB-202ENST00000321728 FGL2Q14314 439 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 PDSS1Q5T2R2 415 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 ELP2Q6IA86 826 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 TSSK4Q6SA08 328 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 SLC36A1Q7Z2H8 476 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 MCATQ8IVS2 390 aaKnown RBP16.43■□□□□ 0.22
PRKCB-202ENST00000321728 LRRC25Q8N386 305 aaPredicted RBP16.43■□□□□ 0.22
PRKCB-202ENST00000321728 HAVCR1Q96D42 359 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 SLC6A17Q9H1V8 727 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 PRSS16Q9NQE7 514 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 FBXO34Q9NWN3 711 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 NCDNQ9UBB6 729 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 SCN2AQ99250 2005 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 NOTCH4Q99466 2003 aa16.43■□□□□ 0.22
PRKCB-202ENST00000321728 ANKRD61A6NGH8 418 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 CDC123O75794 336 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 RAB28P51157 221 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 MTSS1LQ765P7 747 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 OR6K3Q8NGY3 331 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 NKX6-2Q9C056 277 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 C2orf42Q9NWW7 574 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 APOBEC3BQ9UH17 382 aaKnown RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 SNRNP200O75643 2136 aaKnown RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 GPRIN2O60269 458 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 RBBP9O75884 186 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 DBIP07108 87 aaKnown RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 HIST1H1CP16403 213 aaKnown RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 GRPRP30550 384 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 B2MP61769 119 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 ERVK-25P63136 954 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 ILF3Q12906 894 aaKnown RBP eCLIP16.42■□□□□ 0.228e-8■■■■■ 37
PRKCB-202ENST00000321728 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 C12orf40Q86WS4 652 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 ZNF619Q8N2I2 560 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 POMGNT2Q8NAT1 580 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 SP7Q8TDD2 431 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 PHYHIPQ92561 330 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 DEFB118Q96PH6 123 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 INSM2Q96T92 566 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 SLC25A32Q9H2D1 315 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 ZNF281Q9Y2X9 895 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 ZNF98A6NK75 572 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 ABCD4O14678 606 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 ITPKBP27987 946 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 PON3Q15166 354 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 CEBPEQ15744 281 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 MLF2Q15773 248 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 C4orf46Q504U0 113 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 GLB1L2Q8IW92 636 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 KREMEN2Q8NCW0 462 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 OR4C16Q8NGL9 310 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 OR6K6Q8NGW6 343 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 MIB2Q96AX9 1013 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 TSPAN10Q9H1Z9 355 aaPredicted RBP16.42■□□□□ 0.22
PRKCB-202ENST00000321728 TCF7L1Q9HCS4 588 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 ADAP2Q9NPF8 381 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 CPNE7Q9UBL6 633 aa16.42■□□□□ 0.22
PRKCB-202ENST00000321728 NID1P14543 1247 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 ACHEP22303 614 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 MST1P26927 711 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 MPGP29372 298 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 OR5T2Q8NGG2 359 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 ZNF559Q9BR84 538 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 SYNPO2LQ9H987 977 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 TMEM27Q9HBJ8 222 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 KCNE5Q9UJ90 142 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 REV3LO60673 3130 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 ACRP10323 421 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 STARP49675 285 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 FIGNL1Q6PIW4 674 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 ZNF614Q8N883 585 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 BPIFCQ8NFQ6 507 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 OR4D10Q8NGI6 311 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 HSPA12BQ96MM6 686 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 GPR174Q9BXC1 333 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 SLC6A5Q9Y345 797 aa16.41■□□□□ 0.22
PRKCB-202ENST00000321728 A0A087WV48 116 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 MPTX1A8MV57 137 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 SIGLEC6O43699 453 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 ZFPL1O95159 310 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 CALCBP10092 127 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 RPA2P15927 270 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 CBX5P45973 191 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 SOX2P48431 317 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 NANOS3P60323 173 aaKnown RBP16.4■□□□□ 0.22
PRKCB-202ENST00000321728 GAS6Q14393 721 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 PABPC1L2AQ5JQF8 200 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 DCST2Q5T1A1 773 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 LILRB1Q8NHL6 650 aaPredicted RBP16.4■□□□□ 0.22
PRKCB-202ENST00000321728 C15orf40Q8WUR7 153 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 VWCEQ96DN2 955 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 COX14Q96I36 57 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 ZNF350Q9GZX5 532 aa16.4■□□□□ 0.22
PRKCB-202ENST00000321728 SLITRK2Q9H156 845 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms