RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 PDP1Q9P0J1 537 aaPredicted RBP16.28■□□□□ 0.2
HMGA1-201ENST00000311487 KLHL13Q9P2N7 655 aa16.28■□□□□ 0.2
HMGA1-201ENST00000311487 TMCC3Q9ULS5 477 aa16.28■□□□□ 0.2
HMGA1-201ENST00000311487 OSGIN2Q9Y236 505 aa16.28■□□□□ 0.2
HMGA1-201ENST00000311487 CLCA1A8K7I4 914 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 CDC42EP2O14613 210 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 AHSA1O95433 338 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 IDUAP35475 653 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 RPL5P46777 297 aaKnown RBP16.27■□□□□ 0.2
HMGA1-201ENST00000311487 LIMS1P48059 325 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 ESPNLQ6ZVH7 1005 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 MBOAT2Q6ZWT7 520 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 CHMP1BQ7LBR1 199 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 SATL1Q86VE3 508 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 DOLPP1Q86YN1 238 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 FNDC9Q8TBE3 224 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 GTPBP3Q969Y2 492 aaKnown RBP16.27■□□□□ 0.2
HMGA1-201ENST00000311487 BPIFA2Q96DR5 249 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 RDH12Q96NR8 316 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 RBM4BQ9BQ04 359 aaKnown RBP16.27■□□□□ 0.2
HMGA1-201ENST00000311487 RBM4Q9BWF3 364 aaKnown RBP16.27■□□□□ 0.2
HMGA1-201ENST00000311487 C12orf10Q9HB07 376 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 IL20RAQ9UHF4 553 aa16.27■□□□□ 0.2
HMGA1-201ENST00000311487 TRAV36DV7A0A075B6V5 113 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 LIPT2A6NK58 231 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 GJE1A6NN92 205 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 LINC01387J3KSC0 135 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 TGM6O95932 706 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 GASTP01350 101 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 CPN1P15169 458 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 GNLYP22749 145 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 ZER1Q7Z7L7 766 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 TMEM99Q8N816 258 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 TSPAN14Q8NG11 270 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 PRR7Q8TB68 274 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 FAM57AQ8TBR7 257 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 SLC25A43Q8WUT9 341 aaPredicted RBP16.27■□□□□ 0.19
HMGA1-201ENST00000311487 TMEM43Q9BTV4 400 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 YIPF3Q9GZM5 350 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 PRDM14Q9GZV8 571 aa16.27■□□□□ 0.19
HMGA1-201ENST00000311487 TRGV8A0A0C4DH27 118 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 SERPINI2O75830 405 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 AQP8O94778 261 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 CCNB2O95067 398 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 SAGP10523 405 aaPredicted RBP16.26■□□□□ 0.19
HMGA1-201ENST00000311487 GRPRP30550 384 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 SMIM11AP58511 58 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 KCTD21Q4G0X4 260 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 SHQ1Q6PI26 577 aaKnown RBP16.26■□□□□ 0.19
HMGA1-201ENST00000311487 HIPK1Q86Z02 1210 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 ZNF786Q8N393 782 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 ST6GALNAC3Q8NDV1 305 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 OR51A7Q8NH64 312 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 STK35Q8TDR2 534 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 MIB2Q96AX9 1013 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 MBOAT4Q96T53 435 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 TOR3AQ9H497 397 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 CLEC4AQ9UMR7 237 aa16.26■□□□□ 0.19
HMGA1-201ENST00000311487 TRAV27A0A087WT01 109 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 OR14I1A6ND48 311 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 BLOC1S5-TXNDC5H3BN57 136 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 M0R082 166 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 BGLAPP02818 100 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 DNAJA1P31689 397 aaKnown RBP16.25■□□□□ 0.19
HMGA1-201ENST00000311487 RBM34P42696 430 aaKnown RBP16.25■□□□□ 0.19
HMGA1-201ENST00000311487 HMGA2P52926 109 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 NUP107P57740 925 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 IL1RL1Q01638 556 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 ZNF74Q16587 644 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 MICAQ29983 383 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 FAM69AQ5T7M9 428 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 RTL6Q6ICC9 239 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 GPAT4Q86UL3 456 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 AQP11Q8NBQ7 271 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 OR13C2Q8NGS9 318 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 ZNF417Q8TAU3 575 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 SGTBQ96EQ0 304 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 HS6ST2Q96MM7 605 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 ZNF587Q96SQ5 575 aaPredicted RBP16.25■□□□□ 0.19
HMGA1-201ENST00000311487 EPYCQ99645 322 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 TAPBPLQ9BX59 468 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 GRIP2Q9C0E4 1043 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 POLEQ07864 2286 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 FTCDNL1E5RQL4 147 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 PRRG2O14669 202 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 OMPP47874 163 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 AGFG1P52594 562 aaKnown RBP16.25■□□□□ 0.19
HMGA1-201ENST00000311487 PGBD2Q6P3X8 592 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 SLC46A3Q7Z3Q1 461 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 OR10G2Q8NGC3 310 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 ABHD3Q8WU67 409 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 FEVQ99581 238 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 NIPSNAP1Q9BPW8 284 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 POTEKPQ9BYX7 375 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 PRRG4Q9BZD6 226 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 GABARAPL1Q9H0R8 117 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 NANSQ9NR45 359 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 HDGFL3Q9Y3E1 203 aa16.25■□□□□ 0.19
HMGA1-201ENST00000311487 SMIM31A0A1B0GVY4 71 aa16.24■□□□□ 0.19
HMGA1-201ENST00000311487 C11orf98E9PRG8 122 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms