RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SLC6A2P23975 617 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 RPS5P46782 204 aaKnown RBP17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 SPOCK1Q08629 439 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 NPTX1Q15818 432 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 DUSP7Q16829 419 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 TSPYL5Q86VY4 417 aaPredicted RBP17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 P3H2Q8IVL5 708 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 C1orf162Q8NEQ5 155 aaPredicted RBP17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 OR52N5Q8NH56 324 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 TMEM171Q8WVE6 324 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 SLC38A4Q969I6 547 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 TAAR8Q969N4 342 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 FBXW5Q969U6 566 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 Q96MF0 132 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 SLCO5A1Q9H2Y9 848 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 MED4Q9NPJ6 270 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 TESQ9UGI8 421 aaKnown RBP17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 TRIM33Q9UPN9 1127 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 LAMP3Q9UQV4 416 aa17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 MAGED1Q9Y5V3 778 aaPredicted RBP17.39■□□□□ 0.37
PDZRN3-202ENST00000308537 TRIM64A6NGJ6 449 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 TRIM64BA6NI03 449 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 ATP8B1O43520 1251 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 ZNF432O94892 652 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 VAMP5O95183 116 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 AHSA1O95433 338 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 HOXB4P17483 251 aaPredicted RBP17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 SELENOPP49908 381 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 LTBQ06643 244 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 RBBP4Q09028 425 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 C9orf135Q5VTT2 229 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 FAM91A1Q658Y4 838 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 NHLRC1Q6VVB1 395 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 AAED1Q7RTV5 226 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 GPAT4Q86UL3 456 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 KRT73Q86Y46 540 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 KDM8Q8N371 416 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 OR4D11Q8NGI4 311 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 MUCL1Q96DR8 90 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 ARHGDIGQ99819 225 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 SPATA5L1Q9BVQ7 753 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 TAPBPLQ9BX59 468 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 NELFAQ9H3P2 528 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 CACYBPQ9HB71 228 aaKnown RBP17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 SLC17A5Q9NRA2 495 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 FGFR1OP2Q9NVK5 253 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 ARFGEF3Q5TH69 2177 aa17.38■□□□□ 0.37
PDZRN3-202ENST00000308537 A0A087WUJ7 227 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 CIB4A0PJX0 185 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 ELOA3DA6NLF2 546 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 ABCD4O14678 606 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 ANGPT2O15123 496 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 LYPD3O95274 346 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 LGI1O95970 557 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 OPN1SWP03999 348 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 THY1P04216 161 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 INHBBP09529 407 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 CD247P20963 164 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 MPGP29372 298 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 OR1Q1Q15612 314 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 NRF1Q16656 503 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 ELOA3BQ3SY89 546 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 ALG10BQ5I7T1 473 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 OR7E24Q6IFN5 339 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 B3GLCTQ6Y288 498 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 DTX2Q86UW9 622 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 ARMC8Q8IUR7 673 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 C17orf78Q8N4C9 275 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 SMYD1Q8NB12 490 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 C11orf65Q8NCR3 313 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 ELOA3Q8NG57 546 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 SMAP2Q8WU79 429 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 DNAJA4Q8WW22 397 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 SLC41A3Q96GZ6 507 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 POM121Q96HA1 1249 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 TRAF4Q9BUZ4 470 aaPredicted RBP17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 KLHL14Q9P2G3 628 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 RASD1Q9Y272 281 aa17.37■□□□□ 0.37
PDZRN3-202ENST00000308537 PRORSD1PA6NEY8 169 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 CCT8L1PA6NM43 557 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 M0QX08 132 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 CD40P25942 277 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 RGS8P57771 180 aaPredicted RBP17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 NFYCQ13952 458 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 FAM69AQ5T7M9 428 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 TMEM225Q6GV28 225 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 ULK3Q6PHR2 472 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 LINC00114Q6XXX2 140 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 BIVMQ86UB2 503 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 CALHM3Q86XJ0 350 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 POMGNT2Q8NAT1 580 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 BHLHE22Q8NFJ8 381 aaPredicted RBP17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 TAMM41Q96BW9 452 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 SLC25A36Q96CQ1 311 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 ZNF607Q96SK3 696 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 GRIP2Q9C0E4 1043 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 CXorf56Q9H5V9 222 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 CCDC134Q9H6E4 229 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 SAR1AQ9NR31 198 aa17.36■□□□□ 0.37
PDZRN3-202ENST00000308537 UPB1Q9UBR1 384 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms