RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 KRT77Q7Z794 578 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 SIRT6Q8N6T7 355 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 TEX19Q8NA77 164 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 BVESQ8NE79 360 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 BBS1Q8NFJ9 593 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 NSMAFQ92636 917 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 TCEAL3Q969E4 200 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ABHD1Q96SE0 405 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ACTR6Q9GZN1 396 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ISG20L2Q9H9L3 353 aaKnown RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 INPP5EQ9NRR6 644 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 MLXQ9UH92 298 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC13A4Q9UKG4 626 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 SIRT4Q9Y6E7 314 aaPredicted RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 SOCS6O14544 535 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 DVL2O14641 736 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 FZD7O75084 574 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 AIFM1O95831 613 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 CXCL3P19876 107 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ZNF81P51508 661 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 MMP15P51511 669 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 NCBP2P52298 156 aaKnown RBP eCLIP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 VSX2P58304 361 aaPredicted RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 RPS15AP62244 130 aaKnown RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 GSG1Q2KHT4 349 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 LYPD4Q6UWN0 246 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 C5orf46Q6UWT4 87 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 BEND4Q6ZU67 534 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 MBOAT2Q6ZWT7 520 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 BTN2A1Q7KYR7 527 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 CXXC5Q7LFL8 322 aaKnown RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 TMPRSS9Q7Z410 1059 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 UBALD2Q8IYN6 164 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 STPG2Q8N412 459 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR2T33Q8NG76 320 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR5T3Q8NGG3 340 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR56A1Q8NGH5 318 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 TIMP4Q99727 224 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 YIPF4Q9BSR8 244 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ALG8Q9BVK2 526 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 FAIM2Q9BWQ8 316 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 TRIM36Q9NQ86 728 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 HINT3Q9NQE9 182 aaKnown RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 DLL4Q9NR61 685 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 CALML5Q9NZT1 146 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC9B1P1A6NJY1 282 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 GPR171O14626 319 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 BCAT2O15382 392 aaPredicted RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 PLPP2O43688 288 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 HYAL3O43820 417 aaPredicted RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 EIF1BO60739 113 aaKnown RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 UBL3O95164 117 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC35G6P0C7Q6 338 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 EIF1P41567 113 aaKnown RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 DHPSP49366 369 aaPredicted RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 NXPH1P58417 271 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ID2Q02363 134 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 GPR68Q15743 365 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 MICBQ29980 383 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 TMEM35AQ53FP2 167 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 FAM76BQ5HYJ3 339 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 ARMC6Q6NXE6 501 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 BAIAP2L2Q6UXY1 529 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 PGAP1Q75T13 922 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 MEPCEQ7L2J0 689 aaKnown RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 OOSP2Q86WS3 158 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 CPOQ8IVL8 374 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 TOMM5Q8N4H5 51 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 AVL9Q8NBF6 648 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR5W2Q8NH69 310 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 TRMT10AQ8TBZ6 339 aaKnown RBP9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 HAVCR2Q8TDQ0 301 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 COL26A1Q96A83 441 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC38A3Q99624 504 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 MAP3K3Q99759 626 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 SARGQ9BW04 601 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 CACNG6Q9BXT2 260 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 NLGN3Q9NZ94 848 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 PILRAQ9UKJ1 303 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 NPFFR2Q9Y5X5 522 aa9.49□□□□□ -0.89
APOBEC3F-201ENST00000308521 GPR179Q6PRD1 2367 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 CPSF4LA6NMK7 179 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 GSTZ1O43708 216 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 DNASE1P24855 282 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 CAPZA2P47755 286 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 GFERP55789 205 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 TAS2R43P59537 309 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 STXBP1P61764 594 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 DHODHQ02127 395 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 LGALS3BPQ08380 585 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 DYRK1AQ13627 763 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 RUNX2Q13950 521 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 TEX30Q5JUR7 227 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 IL20RBQ6UXL0 311 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 PXKQ7Z7A4 578 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 HMGN2P46Q86SG4 172 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 GKN2Q86XP6 184 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 BAHD1Q8TBE0 780 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 CNRIP1Q96F85 164 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 ZFYVE21Q9BQ24 234 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms