RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 GPX3P22352 226 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ARR3P36575 388 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PREPP48147 710 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 AARDQ4LEZ3 155 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 FAM122CQ6P4D5 195 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 UBALD2Q8IYN6 164 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 GALNT16Q8N428 558 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 C12orf45Q8N5I9 185 aaPredicted RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 SLC35A4Q96G79 324 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MRGPRX4Q96LA9 322 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PKIBQ9C010 78 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 METTL7AQ9H8H3 244 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SLC25A19Q9HC21 320 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 GPR173Q9NS66 373 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 NECAP2Q9NVZ3 263 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 OSER1Q9NX31 292 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PSORS1C1Q9UIG5 152 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 GRXCR1A8MXD5 290 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TPOP07202 933 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CCR9P51686 369 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SIRPAP78324 504 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ELAVL1Q15717 326 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 CST6Q15828 149 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 IGFBP7Q16270 282 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CACUL1Q86Y37 369 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR52J3Q8NH60 311 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CD99L2Q8TCZ2 262 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 NEIL1Q96FI4 390 aaPredicted RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR51V1Q9H2C8 321 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SEMA6CQ9H3T2 930 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 EXTL2Q9UBQ6 330 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CPA4Q9UI42 421 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 GFYI3L273 518 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CA5AP35218 305 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PPP1CAP62136 330 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CHAF1BQ13112 559 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 AGERQ15109 404 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ACOT6Q3I5F7 207 aaPredicted RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 PABPC1L2AQ5JQF8 200 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TAC3Q9UHF0 121 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SSX4O60224 188 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CNOT4O95628 575 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 FBLP22087 321 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 NR0B1P51843 470 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 HHEXQ03014 270 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 IL11RAQ14626 422 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ATP6V1FQ16864 119 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 AKIRIN2Q53H80 203 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 HEPHL1Q6MZM0 1159 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ADGRE4PQ86SQ3 457 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 VRK2Q86Y07 508 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZC3HAV1LQ96H79 300 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 PLEKHA3Q9HB20 300 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 APOBEC3GQ9HC16 384 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 ACTR10Q9NZ32 417 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 KIAA1671Q9BY89 1806 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 IFNL4K9M1U5 179 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TM4SF4P48230 202 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR8B8Q15620 311 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 METTL4Q8N3J2 472 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 LILRB4Q8NHJ6 448 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 KCNK13Q9HB14 408 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 EXOSC3Q9NQT5 275 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 SLC35D1Q9NTN3 355 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 GALPQ9UBC7 116 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CXorf65A6NEN9 183 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 H3BSA7 217 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 DSCR3O14972 297 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CDRT1O95170 752 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 IGLV3-27P01718 113 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 HTR2BP41595 481 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 KCNJ3P48549 501 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 GDI2P50395 445 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 ARSIQ5FYB1 569 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 LRFN4Q6PJG9 635 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 GRAMD2AQ8IUY3 354 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MORN4Q8NDC4 146 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 NTNG2Q96CW9 530 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SLC39A13Q96H72 371 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PLEKHF2Q9H8W4 249 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 FBXW2Q9UKT8 454 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ATP1B1P05026 303 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 IL5P05113 134 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 C1orf94Q6P1W5 598 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ERASQ7Z444 233 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MMP21Q8N119 569 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TMEM178AQ8NBL3 297 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MCHR1Q99705 422 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR51I1Q9H343 314 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 EQTNQ9NQ60 294 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ATXN8OSP0DMR3 200 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 HCCSP53701 268 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CD83Q01151 205 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 GPR19Q15760 415 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 C4orf17Q53FE4 359 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 METRNLQ641Q3 311 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 LHFPL2Q6ZUX7 228 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SSX6Q7RTT6 188 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ANKRD53Q8N9V6 530 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR13D1Q8NGV5 346 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms