RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 KDM8Q8N371 416 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 AMER3Q8N944 861 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF417Q8TAU3 575 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 UBASH3BQ8TF42 649 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 TMEM255BQ8WV15 326 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 S100ZQ8WXG8 99 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 HDAC2Q92769 488 aaKnown RBP8.48□□□□□ -1.05
PTPRE-202ENST00000306042 RAB39BQ96DA2 213 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF587Q96SQ5 575 aaPredicted RBP8.48□□□□□ -1.05
PTPRE-202ENST00000306042 PDCD10Q9BUL8 212 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 PRR14Q9BWN1 585 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 SLC19A3Q9BZV2 496 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 NKX1-2Q9UD57 310 aaPredicted RBP8.48□□□□□ -1.05
PTPRE-202ENST00000306042 RALGAPA2Q2PPJ7 1873 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 H7C1C5 153 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 MASP2O00187 686 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 TIMM8AO60220 97 aaPredicted RBP8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ANKRD34CP0C6C1 535 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 TMEM225BP0DP42 221 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 SPINK2P20155 84 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 HLCSP50747 726 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 LCN6P62502 163 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ZIC1Q15915 447 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 PRTGQ2VWP7 1150 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 SYT14P1Q58G82 188 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 USP43Q70EL4 1123 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 TMEM17Q86X19 198 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 WFDC8Q8IUA0 241 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 OR2V1Q8NHB1 315 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 PPP1R35Q8TAP8 253 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 PRR7Q8TB68 274 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 TIMD4Q96H15 378 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 OR11A1Q9GZK7 315 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 CHST11Q9NPF2 352 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 RASD1Q9Y272 281 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 OR6C70A6NIJ9 312 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 PLOD2O00469 737 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 OR7A10O76100 309 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 HRGP04196 525 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 BMP2P12643 396 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 TGIF1Q15583 401 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 FCRLAQ7L513 359 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 POGLUT1Q8NBL1 392 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 GNRHR2Q96P88 292 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 URM1Q9BTM9 101 aaKnown RBP8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ANKRD19PQ9H560 264 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 VNN3Q9NY84 501 aa8.48□□□□□ -1.05
PTPRE-202ENST00000306042 ACACAQ13085 2346 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 A0A1W2PPV9 198 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 C19orf67A6NJJ6 358 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 RAD51DO75771 328 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 SORBS2O94875 1100 aaKnown RBP8.47□□□□□ -1.05
PTPRE-202ENST00000306042 CD14P08571 375 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 FGF5P12034 268 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 SOX8P57073 446 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 C6orf141Q5SZD1 244 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 ATAD3CQ5T2N8 411 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 SPINK14Q6IE38 97 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 OR5AK2Q8NH90 309 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 HAVCR2Q8TDQ0 301 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 SEC14L4Q9UDX3 406 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 LHX6Q9UPM6 363 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 HSPE1-MOB4S4R3N1 261 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF646O15015 1829 aaPredicted RBP8.47□□□□□ -1.05
PTPRE-202ENST00000306042 A0A1B0GW55 424 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 FAM183AA6NL82 134 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 TNFSF11O14788 317 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 LGI1O95970 557 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 DUX4L2P0CJ85 424 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 DUX4L3P0CJ86 424 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 DUX4L4P0CJ87 422 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 DUX4L5P0CJ88 424 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 DUX4L6P0CJ89 424 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 DUX4L7P0CJ90 424 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 ZNF12P17014 697 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 ARPC4P59998 168 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 FAPQ12884 760 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 RSU1Q15404 277 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 ST3GAL2Q16842 350 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 CISD2Q8N5K1 135 aaKnown RBP8.47□□□□□ -1.05
PTPRE-202ENST00000306042 OR4N2Q8NGD1 307 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 SCNM1Q9BWG6 230 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 DUX4Q9UBX2 424 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 FBXO9Q9UK97 447 aaPredicted RBP8.47□□□□□ -1.05
PTPRE-202ENST00000306042 PLEKHA6Q9Y2H5 1048 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 MN1Q10571 1320 aaPredicted RBP8.47□□□□□ -1.05
PTPRE-202ENST00000306042 NKX2-8O15522 239 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 FUCA1P04066 466 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 ELK4P28324 431 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 RBM34P42696 430 aaKnown RBP8.47□□□□□ -1.05
PTPRE-202ENST00000306042 KIR2DL3P43628 341 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 PITPNAQ00169 270 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 PIGFQ07326 219 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 MAD2L1BPQ15013 274 aaPredicted RBP8.47□□□□□ -1.05
PTPRE-202ENST00000306042 ABCA11PQ4W5N1 156 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 TBPL2Q6SJ96 375 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 SH2D5Q6ZV89 423 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 OR2L13Q8N349 312 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 RAB2BQ8WUD1 216 aa8.47□□□□□ -1.05
PTPRE-202ENST00000306042 CPNE4Q96A23 557 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms