RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GAREM2Q75VX8 874 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 OR51Q1Q8NH59 317 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 TCEAL3Q969E4 200 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 SLC25A32Q9H2D1 315 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 TRAV1-2A0A0B4J238 106 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 B3GALT2O43825 422 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 VEGFDO43915 354 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 NDUFB2O95178 105 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 NFATC1O95644 943 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 NUDT14O95848 222 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 CD2P06729 351 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 DCNP07585 359 aaKnown RBP12.03□□□□□ -0.48
TRIM35-201ENST00000305364 SYN1P17600 705 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 MAKP20794 623 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 WASP42768 502 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 H3F3CQ6NXT2 135 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 ZNF836Q6ZNA1 936 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 EID2Q8N6I1 236 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 APOBEC4Q8WW27 367 aaKnown RBP12.03□□□□□ -0.48
TRIM35-201ENST00000305364 SLC35A4Q96G79 324 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 KLHL15Q96M94 604 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 USB1Q9BQ65 265 aaKnown RBP12.03□□□□□ -0.48
TRIM35-201ENST00000305364 ADAM29Q9UKF5 820 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 INSL6Q9Y581 213 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 PCDHGA9Q9Y5G4 932 aaKnown RBP12.03□□□□□ -0.48
TRIM35-201ENST00000305364 TRIM77I1YAP6 450 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 CCSO14618 274 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 SULT1B1O43704 296 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 CDC40O60508 579 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRIM35-201ENST00000305364 IGSF11Q5DX21 431 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 ZNF615Q8N8J6 731 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 OR4E2Q8NGC2 313 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 DNAJA3Q96EY1 480 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 PTCHD1Q96NR3 888 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 C20orf141Q9NUB4 165 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 RNF186Q9NXI6 227 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 CPNE7Q9UBL6 633 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 TMEM82A0PJX8 343 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 MAN2B1O00754 1011 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 NPC1O15118 1278 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 AGPAT2O15120 278 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 B3GALNT1O75752 331 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 ZNF14P17017 642 aaPredicted RBP12.03□□□□□ -0.48
TRIM35-201ENST00000305364 ZNF626Q68DY1 528 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 ENPP7Q6UWV6 458 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 NDUFAF7Q7L592 441 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 TAF8Q7Z7C8 310 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 NAXDQ8IW45 347 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 C7orf61Q8IZ16 206 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 OR2L5Q8NG80 312 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 LILRB1Q8NHL6 650 aaPredicted RBP12.03□□□□□ -0.48
TRIM35-201ENST00000305364 AHCYL2Q96HN2 611 aaKnown RBP12.03□□□□□ -0.48
TRIM35-201ENST00000305364 C10orf90Q96M02 699 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 SLC46A2Q9BY10 475 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 TM7SF3Q9NS93 570 aa12.03□□□□□ -0.48
TRIM35-201ENST00000305364 SIGLEC6O43699 453 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 SELENOFO60613 162 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 ZNF432O94892 652 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 SNAPINO95295 136 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 CCKBRP32239 447 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 ACTBP60709 375 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 ACTG1P63261 375 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 CSNK1G2P78368 415 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 GXYLT1Q4G148 440 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 ARHGAP40Q5TG30 622 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 LEG1Q6P5S2 330 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 ATRAIDQ6UW56 229 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 TMEM64Q6YI46 380 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 RNF113BQ8IZP6 322 aaKnown RBP12.02□□□□□ -0.48
TRIM35-201ENST00000305364 LNX2Q8N448 690 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 OR51D1Q8NGF3 324 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 OR5M9Q8NGP3 310 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 OR1J4Q8NGS1 313 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 NMNAT3Q96T66 252 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 TSPAN10Q9H1Z9 355 aaPredicted RBP12.02□□□□□ -0.48
TRIM35-201ENST00000305364 C11orf49Q9H6J7 331 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 CCL26Q9Y258 94 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 PPIL1Q9Y3C6 166 aa12.02□□□□□ -0.48
TRIM35-201ENST00000305364 PLSCR5A0PG75 271 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 LRIT2A6NDA9 550 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 NDUFB6O95139 128 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 EGFP01133 1207 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 HLA-AP01891 365 aaKnown RBP12.02□□□□□ -0.49
TRIM35-201ENST00000305364 PBX2P40425 430 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 DNASE1L1P49184 302 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 REEP5Q00765 189 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 PRDX1Q06830 199 aaKnown RBP12.02□□□□□ -0.49
TRIM35-201ENST00000305364 THSD4Q6ZMP0 1018 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 OR4C16Q8NGL9 310 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 WDR34Q96EX3 536 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 PIGMQ9H3S5 423 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 PHPT1Q9NRX4 125 aaPredicted RBP12.02□□□□□ -0.49
TRIM35-201ENST00000305364 CLDND1Q9NY35 253 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 CA5BQ9Y2D0 317 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 ALPK2Q86TB3 2170 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 C1orf196B1AJZ1 125 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 PAPLNO95428 1278 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 RAB28P51157 221 aa12.02□□□□□ -0.49
TRIM35-201ENST00000305364 ILF3Q12906 894 aaKnown RBP eCLIP12.02□□□□□ -0.497e-6■■■■□ 19.9
TRIM35-201ENST00000305364 CDNFQ49AH0 187 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms