RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CD79BP40259 229 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 MRPS21P82921 87 aaKnown RBP12.93□□□□□ -0.34
PRKCB-201ENST00000303531 CLEC1AQ8NC01 280 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 OR6T1Q8NGN1 323 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 FRZBQ92765 325 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 GALNT9Q9HCQ5 603 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 RBFOX1Q9NWB1 397 aaKnown RBP12.93□□□□□ -0.34
PRKCB-201ENST00000303531 ATG4BQ9Y4P1 393 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 PIP5K1CO60331 668 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 CXCL12P48061 93 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 PCBD1P61457 104 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 TMEM176BQ3YBM2 270 aaPredicted RBP12.93□□□□□ -0.34
PRKCB-201ENST00000303531 FAM26DQ5JW98 314 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 IDO2Q6ZQW0 420 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 WFDC5Q8TCV5 224 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 SEMA4GQ9NTN9 838 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 NPPBP16860 134 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 GPX2P18283 190 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 TAS2R46P59540 309 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 OPN5Q6U736 354 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 OLIG3Q7RTU3 272 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 TMEM106AQ96A25 262 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 CMSS1Q9BQ75 279 aaKnown RBP12.93□□□□□ -0.34
PRKCB-201ENST00000303531 CCDC163A0A0D9SF12 145 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 A0A1B0GWA3 101 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 GABARAPO95166 117 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 CR2P20023 1033 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 RPS18P62269 152 aaKnown RBP12.93□□□□□ -0.34
PRKCB-201ENST00000303531 C14orf28Q4W4Y0 310 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 PRICKLE2Q7Z3G6 844 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 SUMF2Q8NBJ7 301 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 RAB9BQ9NP90 201 aa12.93□□□□□ -0.34
PRKCB-201ENST00000303531 A0A1W2PS29 197 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 PSMB1P20618 241 aaKnown RBP12.92□□□□□ -0.34
PRKCB-201ENST00000303531 HTR2CP28335 458 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 C9orf135Q5VTT2 229 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 OR13C9Q8NGT0 318 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 C22orf15Q8WYQ4 148 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 ZNF566Q969W8 418 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 TM7SF3Q9NS93 570 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 DDX60Q8IY21 1712 aaKnown RBP12.92□□□□□ -0.34
PRKCB-201ENST00000303531 TRAPPC2LH3BP13 241 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 RPP30P78346 268 aaKnown RBP12.92□□□□□ -0.34
PRKCB-201ENST00000303531 KDM4DQ6B0I6 523 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 FBXW12Q6X9E4 464 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 ESPNLQ6ZVH7 1005 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 CELF2-AS1Q8N7Q2 184 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 OR14A2Q96R54 314 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 SNX18Q96RF0 628 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 PRR14Q9BWN1 585 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 SLC38A1Q9H2H9 487 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 GCM1Q9NP62 436 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 SYT5O00445 386 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 LIPAP38571 399 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 HENMT1Q5T8I9 393 aaKnown RBP12.92□□□□□ -0.34
PRKCB-201ENST00000303531 FCRL1Q96LA6 429 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 HDAC8Q9BY41 377 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 C1orf198Q9H425 327 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 ANKRD33BA6NCL7 494 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 ZNF169Q14929 603 aaPredicted RBP12.92□□□□□ -0.34
PRKCB-201ENST00000303531 PEA15Q15121 130 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 Q499Y3 187 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 FAM71E1Q6IPT2 247 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 SLC48A1Q6P1K1 146 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 NUDT8Q8WV74 236 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 METTL9Q9H1A3 318 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 BCL6P41182 706 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 XKR7Q5GH72 579 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 WDSUB1Q8N9V3 476 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 LILRB4Q8NHJ6 448 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 SLC25A31Q9H0C2 315 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 EPHX3Q9H6B9 360 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 AQP9O43315 295 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 TGFBR3Q03167 851 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 SYT6Q5T7P8 510 aaPredicted RBP12.92□□□□□ -0.34
PRKCB-201ENST00000303531 MED25Q71SY5 747 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 OR5L1Q8NGL2 311 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 PPA2Q9H2U2 334 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 WDR76Q9H967 626 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 GLTPQ9NZD2 209 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 ATPIF1Q9UII2 106 aa12.92□□□□□ -0.34
PRKCB-201ENST00000303531 DOK2O60496 412 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 TRIM23P36406 574 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 ALKAL2Q6UX46 152 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 OR6V1Q8N148 313 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 ZNF775Q96BV0 537 aaPredicted RBP12.91□□□□□ -0.34
PRKCB-201ENST00000303531 P2RY12Q9H244 342 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 CLEC2DQ9UHP7 191 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 PRAMEF27A3QJZ7 478 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 SSX4O60224 188 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 SCRG1O75711 98 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 SLC34A2O95436 690 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 FCGR2AP12318 317 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 HTR5AP47898 357 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 CSNK1G2P78368 415 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 PRAMEF9Q5VWM5 478 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 UBE2FQ969M7 185 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 GPR78Q96P69 363 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 MED16Q9Y2X0 877 aa12.91□□□□□ -0.34
PRKCB-201ENST00000303531 FBXO24O75426 580 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms