RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 OR5L1Q8NGL2 311 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PIGTQ969N2 578 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF582Q96NG8 517 aaPredicted RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GDE1Q9NZC3 331 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TMEM184BQ9Y519 407 aaPredicted RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ASB4Q9Y574 426 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 DPM1O60762 260 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PTHP01270 115 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 BTN1A1Q13410 526 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 YIF1BQ5BJH7 314 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HIST2H3PS2Q5TEC6 136 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CPXM2Q8N436 756 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TCTN2Q96GX1 697 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 DHRS4Q9BTZ2 278 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CENPOQ9BU64 300 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLAMF7Q9NQ25 335 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 C7orf72A4D263 438 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 WASH4PA8MWX3 477 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CSO75390 466 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 IMPA1P29218 277 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR1D5P58170 312 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PDE7AQ13946 482 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FRMPD2BQ6IN97 320 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CPEB2Q7Z5Q1 589 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SUMF1Q8NBK3 374 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MUL1Q969V5 352 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SGK3Q96BR1 496 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC41A2Q96JW4 573 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NRSN2Q9GZP1 204 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 C1GALT1Q9NS00 363 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GFOD1Q9NXC2 390 aa12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SETD1AO15047 1707 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NAP1L6A6NFF2 107 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OR6C65A6NJZ3 312 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TNFRSF4P43489 277 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HCCSP53701 268 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 HSF5Q4G112 596 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF684Q5T5D7 378 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NPSR1Q6W5P4 371 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ADGRF3Q8IZF5 1079 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PPP1R35Q8TAP8 253 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NOX4Q9NPH5 578 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GABRB3P28472 473 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MED25Q71SY5 747 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PM20D2Q8IYS1 436 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 BHLHE23Q8NDY6 225 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZFAND1Q8TCF1 268 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 DAZAP1Q96EP5 407 aaKnown RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 BSCL2Q96G97 398 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SLC6A18Q96N87 628 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 C1QTNF6Q9BXI9 259 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MYH7BA7E2Y1 1941 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CER1O95813 267 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CDK4P11802 303 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SRP9P49458 86 aaKnown RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CCR6P51684 374 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KCNAB1Q14722 419 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 IDO2Q6ZQW0 420 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KDM8Q8N371 416 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 METTL4Q8N3J2 472 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ALG12Q9BV10 488 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TCEAL2Q9H3H9 227 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CXorf36Q9H7Y0 433 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PRSS16Q9NQE7 514 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PRMT8Q9NR22 394 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RPS10-NUDT3A0A1W2PQS6 291 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MBLAC1A4D2B0 266 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GFRA2O00451 464 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RPS10P46783 165 aaKnown RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RAB38P57729 211 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MLLT11Q13015 90 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 FAM83HQ6ZRV2 1179 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ADIPOR2Q86V24 386 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 MRPL41Q8IXM3 137 aaKnown RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CPPED1Q9BRF8 314 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 ZNF286AQ9HBT8 521 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 TP53P04637 393 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 KCNJ8Q15842 424 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NHSL2Q5HYW2 709 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 RNLSQ5VYX0 342 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 OGFOD3Q6PK18 319 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 PAQR9Q6ZVX9 377 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 LRRC28Q86X40 367 aaPredicted RBP12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 NIPSNAP1Q9BPW8 284 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 GNB4Q9HAV0 340 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 DUSP13Q9UII6 198 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SRPK3Q9UPE1 567 aa12.59□□□□□ -0.39
CHRFAM7A-201ENST00000299847 EFSO43281 561 aa12.58□□□□□ -0.39
CHRFAM7A-201ENST00000299847 SEC14L2O76054 403 aa12.58□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CD46P15529 392 aa12.58□□□□□ -0.39
CHRFAM7A-201ENST00000299847 CLINT1Q14677 625 aa12.58□□□□□ -0.39
CHRFAM7A-201ENST00000299847 DUSP23Q9BVJ7 150 aa12.58□□□□□ -0.39
CHRFAM7A-201ENST00000299847 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.58□□□□□ -0.39
CHRFAM7A-201ENST00000299847 AQP7O14520 342 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SCGB1D1O95968 90 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 GRPP07492 148 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 MMP2P08253 660 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 KITLGP21583 273 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 SLC7A9P82251 487 aa12.58□□□□□ -0.4
CHRFAM7A-201ENST00000299847 PRDX1Q06830 199 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms