RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 IL1AP01583 271 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 GP1BBP13224 206 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 RCVRNP35243 200 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 SERTAD2Q14140 314 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 PRTGQ2VWP7 1150 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 WDR45BQ5MNZ6 344 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 PRAMEF20Q5VT98 475 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 CARD17Q5XLA6 110 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 GUSBP11Q6P575 273 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 LRRC69Q6ZNQ3 347 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 LINGO2Q7L985 606 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 LUZP2Q86TE4 346 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 RNF113BQ8IZP6 322 aaKnown RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF485Q8NCK3 441 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 DNAAF1Q8NEP3 725 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 BEST4Q8NFU0 473 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ZNRF4Q8WWF5 429 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 NSMAFQ92636 917 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 NDEL1Q9GZM8 345 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 TSPAN10Q9H1Z9 355 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ANKRD19PQ9H560 264 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ISYNA1Q9NPH2 558 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ANKRD10Q9NXR5 420 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 MED11Q9P086 117 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 PLEKHB1Q9UF11 243 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 LAMP5Q9UJQ1 280 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 MRTO4Q9UKD2 239 aaKnown RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 KLF4O43474 513 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ALOX12BO75342 701 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 PRKAR1AP10644 381 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 HSD17B7P56937 341 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 TPBGQ13641 420 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 TMEM44Q2T9K0 475 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 GLYR1Q49A26 553 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 MANEAQ5SRI9 462 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 GDPGP1Q6ZNW5 385 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 TRMT10AQ8TBZ6 339 aaKnown RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 STT3BQ8TCJ2 826 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 TSEN15Q8WW01 171 aaKnown RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 LCORQ96JN0 433 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ALG12Q9BV10 488 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 SEC61A2Q9H9S3 476 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 MCCC2Q9HCC0 563 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 B3GAT2Q9NPZ5 323 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 GPR27Q9NS67 375 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF221Q9UK13 617 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ADAM30Q9UKF2 790 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 A0A087WV48 116 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 SHISA7A6NL88 538 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 CENPXA8MT69 81 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 MASP2O00187 686 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 BHLHE40O14503 412 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 SMAD9O15198 467 aaKnown RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 IDH3BO43837 385 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ELK1P19419 428 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 S1PR1P21453 382 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 SFTPDP35247 375 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 GPR3P46089 330 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ZFP69Q49AA0 526 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 GARNL3Q5VVW2 1013 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 SLC6A19Q695T7 634 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ZCCHC12Q6PEW1 402 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 CCDC190Q86UF4 302 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 PM20D2Q8IYS1 436 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 PTPMT1Q8WUK0 201 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 DNAJA4Q8WW22 397 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 HSD17B8Q92506 261 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ORAI3Q9BRQ5 295 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 EMC6Q9BV81 110 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 SLC22A4Q9H015 551 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ABCG5Q9H222 651 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 TP63Q9H3D4 680 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 APMAPQ9HDC9 416 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 FGF20Q9NP95 211 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF222Q9UK12 451 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 SATB2Q9UPW6 733 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 COLQQ9Y215 455 aaPredicted RBP8.5□□□□□ -1.05
PRDM9-201ENST00000296682 TRAPPC4Q9Y296 219 aa8.5□□□□□ -1.05
PRDM9-201ENST00000296682 SLC16A7O60669 478 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 FMO6PO60774 539 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 F8A1P23610 371 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 MAP3K8P41279 467 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 MEP1BQ16820 701 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 SFRP4Q6FHJ7 346 aaPredicted RBP8.49□□□□□ -1.05
PRDM9-201ENST00000296682 LRFN4Q6PJG9 635 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 RBM12BQ8IXT5 1001 aaKnown RBP8.49□□□□□ -1.05
PRDM9-201ENST00000296682 ZBTB8BQ8NAP8 495 aaPredicted RBP8.49□□□□□ -1.05
PRDM9-201ENST00000296682 ZNF248Q8NDW4 579 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 C3orf49Q96BT1 292 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 OMA1Q96E52 524 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 RTN4RQ9BZR6 473 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 MIXL1Q9H2W2 232 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 AKIRIN1Q9H9L7 192 aaPredicted RBP8.49□□□□□ -1.05
PRDM9-201ENST00000296682 RXFP3Q9NSD7 469 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 ADAMTS20P59510 1910 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 TEX51A0A1B0GUA7 166 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 ISPDA4D126 451 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 MEIS3P1A6NDR6 274 aa8.49□□□□□ -1.05
PRDM9-201ENST00000296682 OR6C70A6NIJ9 312 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms