RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 COPZ1P61923 177 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 SIRPAP78324 504 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 PLAURQ03405 335 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 EPS8Q12929 822 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ZNF362Q5T0B9 420 aaPredicted RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 C3orf33Q6P1S2 294 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ZNF550Q7Z398 422 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 GRINAQ7Z429 371 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 LUZP2Q86TE4 346 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 IGFN1Q86VF2 1251 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 MCEMP1Q8IX19 187 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 CBR4Q8N4T8 237 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 PIK3C3Q8NEB9 887 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 OR10A6Q8NH74 314 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ROBO4Q8WZ75 1007 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 TAMM41Q96BW9 452 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 LRRC58Q96CX6 371 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ALPK1Q96QP1 1244 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 OR5B2Q96R09 309 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ZNF607Q96SK3 696 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 SH3GL1Q99961 368 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 SPOCK3Q9BQ16 436 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 ENKD1Q9H0I2 346 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 PCDHAC1Q9H158 963 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 PIF1Q9H611 641 aa10.83□□□□□ -0.68
HMGB2-201ENST00000296503 NPDC1Q9NQX5 325 aaPredicted RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 SMPD3Q9NY59 655 aaPredicted RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 SPIN1Q9Y657 262 aaPredicted RBP10.83□□□□□ -0.68
HMGB2-201ENST00000296503 CACNA1DQ01668 2161 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 PKDREJQ9NTG1 2253 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 HCFC1P51610 2035 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 A0A1W2PNV4 684 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 CYSRT1A8MQ03 144 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 NPPAP01160 153 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 AQP1P29972 269 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 GABARAPL2P60520 117 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 ADGRG3Q86Y34 549 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 EPHX4Q8IUS5 362 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 CADM2Q8N3J6 435 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 RNF148Q8N7C7 305 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 C11orf65Q8NCR3 313 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 CANT1Q8WVQ1 401 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 SLC39A3Q9BRY0 314 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 KAT8Q9H7Z6 458 aaKnown RBP10.82□□□□□ -0.68
HMGB2-201ENST00000296503 RNF122Q9H9V4 155 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 CLEC4AQ9UMR7 237 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 ANGPT4Q9Y264 503 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 CORINQ9Y5Q5 1042 aa10.82□□□□□ -0.68
HMGB2-201ENST00000296503 CENPEQ02224 2701 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 TMED7-TICAM2A0A0A6YYA0 188 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 DHRS12A0PJE2 317 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 SAC3D1A6NKF1 404 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 CD247P20963 164 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 TACR3P29371 465 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 ACAA2P42765 397 aaKnown RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 SLC1A3P43003 542 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 GSSP48637 474 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 POLR2HP52434 150 aaKnown RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 CTBP2P56545 445 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 RBBP4Q09028 425 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 CYBRD1Q53TN4 286 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 PARP8Q8N3A8 854 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 RNASE6Q93091 150 aaKnown RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 CPNE4Q96A23 557 aaPredicted RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 PIGMQ9H3S5 423 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 CHRNA9Q9UGM1 479 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 SLC13A4Q9UKG4 626 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 TMED7Q9Y3B3 224 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 CHST2Q9Y4C5 530 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 SULT2B1O00204 365 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 FAAHO00519 579 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 RGS13O14921 159 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 FRS3O43559 492 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 TIPRLO75663 272 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 TNFSF13O75888 250 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 PRG2P13727 222 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 ZNF182P17025 639 aaPredicted RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 CXCR1P25024 350 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 FKBP2P26885 142 aaKnown RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 KIR2DL2P43627 348 aaPredicted RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 DLX5P56178 289 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 RAC3P60763 192 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 ITGADQ13349 1161 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 TOP3AQ13472 1001 aaPredicted RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 SNTB1Q13884 538 aaKnown RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 FXNQ16595 210 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 SYT14P1Q58G82 188 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 RABL3Q5HYI8 236 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 SLX4IPQ5VYV7 408 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 WBP2NLQ6ICG8 309 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 VWA1Q6PCB0 445 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 FAM214BQ7L5A3 538 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 BTLAQ7Z6A9 289 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 SERPINA11Q86U17 422 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 PTOV1Q86YD1 416 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 ARMC8Q8IUR7 673 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 DMRTC2Q8IXT2 367 aaPredicted RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 SLC25A43Q8WUT9 341 aaPredicted RBP10.81□□□□□ -0.68
HMGB2-201ENST00000296503 STARD4Q96DR4 205 aa10.81□□□□□ -0.68
HMGB2-201ENST00000296503 DNAJA3Q96EY1 480 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms