RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 BPIFA2Q96DR5 249 aa13.61□□□□□ -0.23
CCDC140-201ENST00000295226 GPR137Q96N19 417 aa13.61□□□□□ -0.23
CCDC140-201ENST00000295226 MUS81Q96NY9 551 aa13.61□□□□□ -0.23
CCDC140-201ENST00000295226 NIPSNAP1Q9BPW8 284 aa13.61□□□□□ -0.23
CCDC140-201ENST00000295226 SEC14L4Q9UDX3 406 aa13.61□□□□□ -0.23
CCDC140-201ENST00000295226 RSL24D1Q9UHA3 163 aaKnown RBP13.61□□□□□ -0.23
CCDC140-201ENST00000295226 SMG1Q96Q15 3661 aaKnown RBP13.61□□□□□ -0.23
CCDC140-201ENST00000295226 ZGRF1Q86YA3 2104 aa13.61□□□□□ -0.23
CCDC140-201ENST00000295226 TRAV36DV7A0A075B6V5 113 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 A0A1B0GVC2 190 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 CDC42EP2O14613 210 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 LSAMPQ13449 338 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 OR7A5Q15622 319 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 CTU2Q2VPK5 515 aaKnown RBP13.6□□□□□ -0.23
CCDC140-201ENST00000295226 ZIK1Q3SY52 487 aaPredicted RBP13.6□□□□□ -0.23
CCDC140-201ENST00000295226 RNF113BQ8IZP6 322 aaKnown RBP13.6□□□□□ -0.23
CCDC140-201ENST00000295226 OR5M9Q8NGP3 310 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 SGTBQ96EQ0 304 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 ZNF845Q96IR2 970 aaPredicted RBP13.6□□□□□ -0.23
CCDC140-201ENST00000295226 KLHL15Q96M94 604 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 PLSCR2Q9NRY7 297 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 CAMK2AQ9UQM7 478 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 SPIN1Q9Y657 262 aaPredicted RBP13.6□□□□□ -0.23
CCDC140-201ENST00000295226 CEPT1Q9Y6K0 416 aa13.6□□□□□ -0.23
CCDC140-201ENST00000295226 LOC100130705A0A1B0GUX0 176 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 ATXN7O15265 892 aaPredicted RBP13.59□□□□□ -0.23
CCDC140-201ENST00000295226 AHSA1O95433 338 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 ACTL6AO96019 429 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 BGLAPP02818 100 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 ZNF708P17019 499 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 IGFBP5P24593 272 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 DIO1P49895 249 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 DAPP51397 102 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 TDGF1P3P51864 188 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 OR2B6P58173 313 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 KEAP1Q14145 624 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 ZNF74Q16587 644 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 ZNF773Q6PK81 442 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 SLC46A3Q7Z3Q1 461 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 ATG16L2Q8NAA4 619 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 ZNF420Q8TAQ5 688 aaPredicted RBP13.59□□□□□ -0.23
CCDC140-201ENST00000295226 SLC25A43Q8WUT9 341 aaPredicted RBP13.59□□□□□ -0.23
CCDC140-201ENST00000295226 WDYHV1Q96HA8 205 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 MBOAT4Q96T53 435 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 SRXN1Q9BYN0 137 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 POTEKPQ9BYX7 375 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 ALKBH4Q9NXW9 302 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 IGHV3-15A0A0B4J1V0 119 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 LIPT2A6NK58 231 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 LINC01387J3KSC0 135 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 SULT2B1O00204 365 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 AQP7O14520 342 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 CXCL13O43927 109 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 MITFO75030 526 aaPredicted RBP13.59□□□□□ -0.23
CCDC140-201ENST00000295226 CLIC3O95833 236 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 PRB1P04280 392 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 IGFBP1P08833 259 aaPredicted RBP13.59□□□□□ -0.23
CCDC140-201ENST00000295226 SAGP10523 405 aaPredicted RBP13.59□□□□□ -0.23
CCDC140-201ENST00000295226 IDUAP35475 653 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 EIF1AXP47813 144 aaKnown RBP13.59□□□□□ -0.23
CCDC140-201ENST00000295226 CTBP2P56545 445 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 IL1RL1Q01638 556 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 KDM4DQ6B0I6 523 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 HBMQ6B0K9 141 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 C1orf94Q6P1W5 598 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 TMPPEQ6ZT21 453 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 GALNT5Q7Z7M9 940 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 OR13C2Q8NGS9 318 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 OR10D3Q8NH80 312 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 OSTF1Q92882 214 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 ADGRG7Q96K78 797 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 SLC19A3Q9BZV2 496 aa13.59□□□□□ -0.23
CCDC140-201ENST00000295226 TMEFF2Q9UIK5 374 aaPredicted RBP13.59□□□□□ -0.23
CCDC140-201ENST00000295226 TRAV27A0A087WT01 109 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 EFCAB9A8MZ26 197 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF814B7Z6K7 855 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 FTCDNL1E5RQL4 147 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 OR7A10O76100 309 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 AKR7A3O95154 331 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 CCDC159P0C7I6 412 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 JUNBP17275 347 aaPredicted RBP13.58□□□□□ -0.24
CCDC140-201ENST00000295226 GRPRP30550 384 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 MAP2K6P52564 334 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 CARD18P57730 90 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 KRTCAP3Q53RY4 240 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 FAM69AQ5T7M9 428 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 ZNF691Q5VV52 312 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 ARHGAP11AQ6P4F7 1023 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 CDK20Q8IZL9 346 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 GHDCQ8N2G8 530 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 KDM8Q8N371 416 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 OR51A7Q8NH64 312 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 OR2V1Q8NHB1 315 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 CPT1CQ8TCG5 803 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 GNPDA2Q8TDQ7 276 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 NMD3Q96D46 503 aaKnown RBP13.58□□□□□ -0.24
CCDC140-201ENST00000295226 APOL4Q9BPW4 351 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 SLX1AQ9BQ83 275 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 HDGFL3Q9Y3E1 203 aa13.58□□□□□ -0.24
CCDC140-201ENST00000295226 KMT2BQ9UMN6 2715 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms