RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 UPP1Q16831 310 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 EDAQ92838 391 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 MOCOSQ96EN8 888 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 C4orf36Q96KX1 117 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 OR6C76A6NM76 312 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 SOX15O60248 233 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 DTYMKP23919 212 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 SLC39A5Q6ZMH5 540 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 NAT6Q93015 286 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 BARHL1Q9BZE3 327 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 XYLT2Q9H1B5 865 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 ATP13A2Q9NQ11 1180 aa11.6□□□□□ -0.55
SLX4-201ENST00000294008 PGGT1BP53609 377 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 INHBCP55103 352 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 OR52N5Q8NH56 324 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 C11orf40Q8WZ69 217 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 DNMT3BQ9UBC3 853 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 TULP4Q9NRJ4 1543 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 A0A096LPI6 279 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 MEGF11A6BM72 1044 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 SRPX2O60687 465 aaPredicted RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 PMP2P02689 132 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 FAM157BP0CG42 384 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 CD70P32970 193 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 DBPQ10586 325 aaPredicted RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 GPR18Q14330 331 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 PGAP1Q75T13 922 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 ZNF595Q8IYB9 648 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 CISD2Q8N5K1 135 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 ZNF597Q96LX8 424 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 STACQ99469 402 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 WDR83Q9BRX9 315 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 ANKRD19PQ9H560 264 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 ZNF334Q9HCZ1 680 aaPredicted RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 CAMSAP1Q5T5Y3 1602 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 PLXDC2Q6UX71 529 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 TMEM64Q6YI46 380 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 PLPP5Q8NEB5 264 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 OR9Q2Q8NGE9 314 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 MUS81Q96NY9 551 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 MGLLQ99685 303 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 ZNF251Q9BRH9 671 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 HES4Q9HCC6 221 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 NXT1Q9UKK6 140 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 ZNF716A6NP11 495 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 GK3PQ14409 553 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 TCTN1Q2MV58 587 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 CHDHQ8NE62 594 aaPredicted RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 GPR32P1Q8NGA4 272 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 OR1S2Q8NGQ3 325 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 OR51H1Q8NH63 302 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 GPR119Q8TDV5 335 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 SLC7A6Q92536 515 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 FBXO17Q96EF6 278 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 CHST6Q9GZX3 395 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 MMP28Q9H239 520 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 HINT3Q9NQE9 182 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 CBLCQ9ULV8 474 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 MBD5Q9P267 1494 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 A0A0U1RQS6 177 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 ALOX12BO75342 701 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 BMPR1AP36894 532 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 MRPL10Q7Z7H8 261 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 ACVR1CQ8NER5 493 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 TRUB1Q8WWH5 349 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 DEDD2Q8WXF8 326 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 RAB6CQ9H0N0 254 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 ISYNA1Q9NPH2 558 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 ACKR3P25106 362 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 SLC5A2P31639 672 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 DCDP81605 110 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 PIWIL3Q7Z3Z3 882 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 LINC00346Q8IVM7 164 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 LMNTD1Q8N9Z9 388 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 LILRB1Q8NHL6 650 aaPredicted RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 ST8SIA4Q92187 359 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 OR2M2Q96R28 347 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 PARP12Q9H0J9 701 aaKnown RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 WRAP73Q9P2S5 460 aaPredicted RBP11.59□□□□□ -0.55
SLX4-201ENST00000294008 KCND3Q9UK17 655 aa11.59□□□□□ -0.55
SLX4-201ENST00000294008 A0A1W2PRD5 423 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 A0A1W2PRF3 423 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 A0A1W2PRM7 423 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 IL2RAP01589 272 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 RBP4P02753 201 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 SYT9Q86SS6 491 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 TMEM139Q8IV31 216 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 NUP37Q8NFH4 326 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 OR2T35Q8NGX2 323 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 LRFN3Q9BTN0 628 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 CRLF2Q9HC73 371 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 GALNT9Q9HCQ5 603 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 A0A1W2PQL4 384 aaPredicted RBP11.58□□□□□ -0.56
SLX4-201ENST00000294008 SSTR2P30874 369 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 OR4M1Q8NGD0 313 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 MRPS24Q96EL2 167 aaKnown RBP11.58□□□□□ -0.56
SLX4-201ENST00000294008 SLC6A20Q9NP91 592 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 IL26Q9NPH9 171 aa11.58□□□□□ -0.56
SLX4-201ENST00000294008 SLC2A9Q9NRM0 540 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms