RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 TO15178 435 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 FBXO24O75426 580 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 AK1P00568 194 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 NR2C1P13056 603 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 AMY2BP19961 511 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 CHRFAM7AQ494W8 412 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 C6orf132Q5T0Z8 1188 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 ZBTB37Q5TC79 503 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 NXNL2Q5VZ03 156 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 HBMQ6B0K9 141 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 ADAM5Q6NVV9 412 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 STEAP2Q8NFT2 490 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 OR5M3Q8NGP4 307 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 SLC7A13Q8TCU3 470 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 TMEM234Q8WY98 164 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 MARC2Q969Z3 335 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 SULT4A1Q9BR01 284 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 SEC22CQ9BRL7 303 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 GPATCH2Q9NW75 528 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 DOCK5Q9H7D0 1870 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 CCDC187A0A096LP49 1063 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 TMEM202A6NGA9 273 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 FRS3O43559 492 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 GLP1RP43220 463 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 HERV-K104P61576 105 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 IL13RA1P78552 427 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 GPR157Q5UAW9 335 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 TANKQ92844 425 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 FOXRED1Q96CU9 486 aaPredicted RBP10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 RSPRY1Q96DX4 576 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 ZMYND19Q96E35 227 aaPredicted RBP10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 IP6K3Q96PC2 410 aa10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 ZNF701Q9NV72 531 aaPredicted RBP10.56□□□□□ -0.72
NPC1L1-201ENST00000289547 MYO7AQ13402 2215 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 ZNF736B4DX44 427 aaPredicted RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 HSD11B1P28845 292 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 SHC1P29353 583 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 KCNJ5P48544 419 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 EPHA4P54764 986 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 FCRLBQ6BAA4 426 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 ARHGAP11AQ6P4F7 1023 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 C6orf15Q6UXA7 325 aaPredicted RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 NUP43Q8NFH3 380 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 OR4M1Q8NGD0 313 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 SCGB1C1Q8TD33 95 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 C16orf78Q8WTQ4 265 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 GPR78Q96P69 363 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 MAP3K3Q99759 626 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 NIPSNAP1Q9BPW8 284 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 SMCO4Q9NRQ5 59 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 RXFP3Q9NSD7 469 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 CDC14CA4D256 554 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 OR5K3A6NET4 321 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 MED6O75586 246 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 GP1BBP13224 206 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 NME1P15531 152 aaKnown RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 TACR1P25103 407 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 ETV6P41212 452 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 DUSP7Q16829 419 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 METRNLQ641Q3 311 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 LCN10Q6JVE6 187 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 FCRLAQ7L513 359 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 CCDC71Q8IV32 467 aaPredicted RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 SLC38A6Q8IZM9 456 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 OR5T1Q8NG75 326 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 TERB2Q8NHR7 220 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 TMEM163Q8TC26 289 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 SLIRPQ9GZT3 109 aaKnown RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 DUSP15Q9H1R2 295 aaPredicted RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 SEC61A2Q9H9S3 476 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 BRF2Q9HAW0 419 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 B3GAT2Q9NPZ5 323 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 PPP4R1LQ9P1A2 415 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 MYEF2Q9P2K5 600 aaKnown RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 A0A0G2JMZ2 1700 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 A0A0A6YYC8 382 aaPredicted RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 D6RAR5 112 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 I3L1I5 382 aaPredicted RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 ZNF208O43345 1280 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 EMC8O43402 210 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 UBL3O95164 117 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 TXNDC12O95881 172 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 SLC6A9P48067 706 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 CXADRP78310 365 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 CTSL3PQ5NE16 218 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 NKAIN2Q5VXU1 208 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 PODNL1Q6PEZ8 512 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 KCTD18Q6PI47 426 aaPredicted RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 RFLNAQ6ZTI6 216 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 BCDIN3DQ7Z5W3 292 aaKnown RBP10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 TPRA1Q86W33 373 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 KMT5CQ86Y97 462 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 TMEM151BQ8IW70 566 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 OR10Z1Q8NGY1 313 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 MYEOVQ96EZ4 313 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 RADILQ96JH8 1075 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 TEX101Q9BY14 249 aa10.55□□□□□ -0.72
NPC1L1-201ENST00000289547 SCPEP1Q9HB40 452 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms