RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 S1PR1P21453 382 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 FGF9P31371 208 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 C1orf61Q13536 156 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 PDE7AQ13946 482 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF169Q14929 603 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 C17orf107Q6ZR85 190 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 MBOAT2Q6ZWT7 520 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 PRSS42Q7Z5A4 293 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 SLC51BQ86UW2 128 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 CD300LFQ8TDQ1 290 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 MAFIPQ8WZ33 124 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 CDS1Q92903 461 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 TCEAL3Q969E4 200 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 TM4SF18Q96CE8 201 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 FGF20Q9NP95 211 aaPredicted RBP10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 DHDHQ9UQ10 334 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 CHST2Q9Y4C5 530 aa10.67□□□□□ -0.7
CLSTN3-201ENST00000266546 SYT5O00445 386 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 AK1P00568 194 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 EIF4EP06730 217 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 AKR1C4P17516 323 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 CD38P28907 300 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF79Q15937 498 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 NKPD1Q17RQ9 610 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 CLVS2Q5SYC1 327 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 RPL22L1Q6P5R6 122 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 LEG1Q6P5S2 330 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 KCTD18Q6PI47 426 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 MMP21Q8N119 569 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 OR13C2Q8NGS9 318 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 MAFAQ8NHW3 353 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 SFXN5Q8TD22 340 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 BARHL1Q9BZE3 327 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 NXF2Q9GZY0 626 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 CHST8Q9H2A9 424 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 GLIPR2Q9H4G4 154 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 CACNA1EQ15878 2313 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 CHP2O43745 196 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 DCNP07585 359 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 SPARCP09486 303 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 PET100P0DJ07 73 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 SIRPAP78324 504 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 DECR1Q16698 335 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 CCNJQ5T5M9 372 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 C12orf73Q69YU5 71 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 DUSP18Q8NEJ0 188 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 PXT1Q8NFP0 134 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 OR1J4Q8NGS1 313 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF417Q8TAU3 575 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 TMEM41AQ96HV5 264 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 OR14A2Q96R54 314 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 RGCCQ9H4X1 137 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 NRIP3Q9NQ35 241 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 HINT3Q9NQE9 182 aaKnown RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 TM7SF3Q9NS93 570 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 WNT16Q9UBV4 365 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 TRIM64BA6NI03 449 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 HMGN4O00479 90 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 CEACAM5P06731 702 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF20P17024 532 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 HIST1H1TP22492 207 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 REEP5Q00765 189 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 CRMP1Q14194 572 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 GFOD2Q3B7J2 385 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 COL13A1Q5TAT6 717 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 GLB1L2Q8IW92 636 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 LAS2Q8IYD9 372 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 SLC6A17Q9H1V8 727 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 FGF22Q9HCT0 170 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 PLEKHB1Q9UF11 243 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 NPIPA5A0A0B4J1W7 369 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 A0A0D9SG52 128 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 LEUTXA8MZ59 168 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 NPIPA7E9PJI5 369 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 PLPP1O14494 284 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 SGCEO43556 437 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 SNAPINO95295 136 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 SCGB1D2O95969 90 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 GIPP09681 153 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 NPIPA8P0DM63 369 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 GABRG2P18507 467 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 GAB4Q2WGN9 574 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 NKAPLQ5M9Q1 402 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 DNAAF1Q8NEP3 725 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 TMEM255BQ8WV15 326 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 RLN3Q8WXF3 142 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 MS4A8Q9BY19 250 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 ZNF443Q9Y2A4 671 aaPredicted RBP10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 SLC6A5Q9Y345 797 aa10.66□□□□□ -0.7
CLSTN3-201ENST00000266546 ARID1AO14497 2285 aa10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 SVILO95425 2214 aa10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 PLA2G10O15496 165 aa10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 WDPCPO95876 746 aa10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 CD27P26842 260 aa10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 SEC61A1P61619 476 aaKnown RBP10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 NNATQ16517 81 aa10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 KRBOX4Q5JUW0 171 aa10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 FIGLAQ6QHK4 219 aa10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 ESPNLQ6ZVH7 1005 aa10.65□□□□□ -0.7
CLSTN3-201ENST00000266546 SSX6Q7RTT6 188 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms