RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 C11orf98E9PRG8 122 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 CYTIPO60759 359 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 CH25HO95992 272 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 PRF1P14222 555 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 PPP1R8Q12972 351 aaKnown RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 RNPS1Q15287 305 aaKnown RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 POU4F3Q15319 338 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 FGD3Q5JSP0 725 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 FAM69AQ5T7M9 428 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 PAQR6Q6TCH4 344 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 C6orf89Q6UWU4 347 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 PRRC1Q96M27 445 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 MEPEQ9NQ76 525 aaPredicted RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 MAN2C1Q9NTJ4 1040 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 DCAF13Q9NV06 445 aaKnown RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 TESMINQ9Y4I5 508 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 TRAV36DV7A0A075B6V5 113 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 AQP7P3A6NL99 342 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 A8MXE2 369 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 FMO6PO60774 539 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 LYZL6O75951 148 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 CGAP01215 116 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 YES1P07947 543 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 HLA-DOBP13765 273 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 COX6B1P14854 86 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 CDH2P19022 906 aaPredicted RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 AHCYP23526 432 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 FOXG1P55316 489 aaPredicted RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 H3F3AP84243 136 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 TMEM225Q6GV28 225 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 TBPL2Q6SJ96 375 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 TFAP2EQ6VUC0 442 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 C22orf34Q6ZV56 151 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 UBE2J2Q8N2K1 259 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 OR6K3Q8NGY3 331 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 MARVELD3Q96A59 401 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 ALKBH3Q96Q83 286 aaPredicted RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 MED29Q9NX70 200 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 RPS6KA6Q9UK32 745 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 SAMD4AQ9UPU9 718 aaKnown RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 NOSIPQ9Y314 301 aaKnown RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 KLF2Q9Y5W3 355 aaPredicted RBP6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 FLVCR1Q9Y5Y0 555 aa6.43□□□□□ -1.38
DEPDC1B-201ENST00000265036 MSTNO14793 375 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 HPRP00739 348 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 BGLAPP02818 100 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 POU2F1P14859 743 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 GPR4P46093 362 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 SELENOPP49908 381 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 P2RY4P51582 365 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 POU3F1Q03052 451 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 SLC17A1Q14916 467 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 LAPTM4AQ15012 233 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 SWT1Q5T5J6 900 aaKnown RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 TTC33Q6PID6 262 aaPredicted RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 WDFY1Q8IWB7 410 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 NRMQ8IXM6 262 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF100Q8IYN0 542 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 SLC43A2Q8N370 569 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 OR9K2Q8NGE7 335 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 PIGXQ8TBF5 258 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 STK35Q8TDR2 534 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 TMEM239Q8WW34 195 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 RNASE6Q93091 150 aaKnown RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 EMC6Q9BV81 110 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 FNDC11Q9BVV2 318 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 CADM1Q9BY67 442 aaKnown RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 POTEKPQ9BYX7 375 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 BCO1Q9HAY6 547 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 CHST11Q9NPF2 352 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 CRIM1Q9NZV1 1036 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 NDUFAF4Q9P032 175 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 B3GAT1Q9P2W7 334 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 TRAPPC4Q9Y296 219 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 ARID1AO14497 2285 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 USF3Q68DE3 2245 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 TEP1Q99973 2627 aaKnown RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 PDZD2O15018 2839 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 TRBV4-1A0A0J9YWV2 114 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 A0A1W2PR80 420 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 EIF1BO60739 113 aaKnown RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 PRSS23O95084 383 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 OR5F1O95221 314 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 IL18BPO95998 194 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 ADORA3P0DMS8 318 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 DNAJA1P31689 397 aaKnown RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 CLK1P49759 484 aaKnown RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 CLDN17P56750 224 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 SPIBQ01892 262 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 BNIP1Q12981 228 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 TRIM25Q14258 630 aaKnown RBP6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 MELKQ14680 651 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 STK11Q15831 433 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 ZNF74Q16587 644 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 FXNQ16595 210 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 CARD17Q5XLA6 110 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 GTF2IRD2BQ6EKJ0 949 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 GALNT5Q7Z7M9 940 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 GTF2IRD2Q86UP8 949 aa6.42□□□□□ -1.38
DEPDC1B-201ENST00000265036 CXorf67Q86X51 503 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms