RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 SERINC2Q96SA4 455 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 KXD1Q9BQD3 176 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 TIMM29Q9BSF4 260 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 MYEF2Q9P2K5 600 aaKnown RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 ING1Q9UK53 422 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 C19orf53Q9UNZ5 99 aaPredicted RBP11.38□□□□□ -0.59
CHMP3-201ENST00000263856 OR10H1Q9Y4A9 318 aa11.38□□□□□ -0.59
CHMP3-201ENST00000263856 TCRBV16S1A1N1A0A5B0 115 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 CARNS1A5YM72 827 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 HRKO00198 91 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 PIN1P1O15428 100 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 PRICKLE3O43900 615 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 NDUFB2O95178 105 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 F13BP05160 661 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 LINC00271P0C7V0 271 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 UBL4AP11441 157 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 CXCL2P19875 107 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 NANOS3P60323 173 aaKnown RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 ACTA2P62736 377 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 ACTG2P63267 376 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 PLA2G7Q13093 441 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 METTL11BQ5VVY1 283 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 BPHLQ86WA6 291 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 BOLLQ8N9W6 283 aaKnown RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 OR5M1Q8NGP8 315 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 TOX2Q96NM4 488 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 OR2M4Q96R27 311 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 C1QTNF7Q9BXJ2 289 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 ACTR6Q9GZN1 396 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 MKKSQ9NPJ1 570 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 V9GY05 133 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 PRSS38A1L453 326 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 OR6C68A6NDL8 312 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 ANXA2P2A6NMY6 339 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 IFITM5A6NNB3 132 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 H0YGG7 62 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 CDK2AP1O14519 115 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 KHNYNO15037 678 aaKnown RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 DOK2O60496 412 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 ZFPL1O95159 310 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 SPDEFO95238 335 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 GPANK1O95872 356 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 TIMP1P01033 207 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 ANXA2P07355 339 aaKnown RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 TYRP1P17643 537 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 SLC2A5P22732 501 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 ARF3P61204 181 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 PPP2CBP62714 309 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 PPP2CAP67775 309 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 LGALS3BPQ08380 585 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 PCGF3Q3KNV8 242 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 TNFAIP8L1Q8WVP5 186 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 DVL3Q92997 716 aaPredicted RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 Q96M85 177 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 ADAD1Q96M93 576 aaKnown RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 CD93Q9NPY3 652 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 PCDHGA9Q9Y5G4 932 aaKnown RBP11.37□□□□□ -0.59
CHMP3-201ENST00000263856 PCDHGA5Q9Y5G8 931 aa11.37□□□□□ -0.59
CHMP3-201ENST00000263856 TEX51A0A1B0GUA7 166 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 PCP4L1A6NKN8 68 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 GOSR2O14653 212 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SC5DO75845 299 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 OR2T7P0C7T2 308 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 ARHGDIBP52566 201 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 RPS11P62280 158 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 RPS21P63220 83 aaKnown RBP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 RPL22L1Q6P5R6 122 aaKnown RBP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 FAM198BQ6UWH4 519 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 LSMEM1Q8N8F7 131 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 OR2T27Q8NH04 317 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 OR1E3Q8WZA6 343 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SLC25A38Q96DW6 304 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 ASB16Q96NS5 453 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 JAM3Q9BX67 310 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SDHAF2Q9NX18 166 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 THAP10Q9P2Z0 257 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 POMT2Q9UKY4 750 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 URADA6NGE7 173 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 H0YC42 278 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 CSN2P05814 226 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 GAAP10253 952 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 RRASP10301 218 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 UGT2B7P16662 529 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 ITPKBP27987 946 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 FNTBP49356 437 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 AP3S2P59780 193 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 GUCA2AQ02747 115 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 PLAURQ03405 335 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 RUNX3Q13761 415 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 FAM199XQ6PEV8 388 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 ABHD13Q7L211 337 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 FAM220AQ7Z4H9 259 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 FAM3CQ92520 227 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SGTBQ96EQ0 304 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 TRAF4Q9BUZ4 470 aaPredicted RBP11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SLITRK2Q9H156 845 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 TRPV4Q9HBA0 871 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SLC22A7Q9Y694 548 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 SESN1Q9Y6P5 492 aa11.36□□□□□ -0.59
CHMP3-201ENST00000263856 TRAV1-2A0A0B4J238 106 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms