RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 TMEM88Q6PEY1 159 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 UNQ9370/PRO34162Q6UXP9 181 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 MOB3CQ70IA8 216 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 ZNF707Q96C28 371 aaPredicted RBP13.77□□□□□ -0.2
XRCC1-201ENST00000262887 C10orf90Q96M02 699 aa13.77□□□□□ -0.2
XRCC1-201ENST00000262887 TSNAXQ99598 290 aaKnown RBP13.77□□□□□ -0.2
XRCC1-201ENST00000262887 CCDC86Q9H6F5 360 aaKnown RBP13.77□□□□□ -0.2
XRCC1-201ENST00000262887 MTHFD2LQ9H903 347 aaPredicted RBP13.77□□□□□ -0.2
XRCC1-201ENST00000262887 CENPVL1A0A0U1RR11 272 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 RFPL4AA6NLU0 287 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 RFPL4AL1F8VTS6 287 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 SGCEO43556 437 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 RPN2P04844 631 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 F3P13726 295 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 TMIEQ8NEW7 156 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 TMEM185AQ8NFB2 350 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 SCLYQ96I15 445 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 MRGPRX3Q96LB0 322 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 DUXAA6NLW8 204 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 PIN1P1O15428 100 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 EIF4E2O60573 245 aaKnown RBP13.77□□□□□ -0.21
XRCC1-201ENST00000262887 ELNP15502 786 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 HTR2AP28223 471 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 RORAP35398 523 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 HSD17B2P37059 387 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 NAA10P41227 235 aaPredicted RBP13.77□□□□□ -0.21
XRCC1-201ENST00000262887 TAS2R20P59543 309 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 RPS15P62841 145 aaKnown RBP13.77□□□□□ -0.21
XRCC1-201ENST00000262887 TMEM35AQ53FP2 167 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 EIPR1Q53HC9 387 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 AMZ2Q86W34 360 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 SYS1Q8N2H4 156 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 C15orf40Q8WUR7 153 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 PHYHIPQ92561 330 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 HAVCR1Q96D42 359 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 SLC46A2Q9BY10 475 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 C6orf106Q9H6K1 298 aaPredicted RBP13.77□□□□□ -0.21
XRCC1-201ENST00000262887 OR5V1Q9UGF6 321 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 V9GY05 133 aa13.77□□□□□ -0.21
XRCC1-201ENST00000262887 SPTBN5Q9NRC6 3674 aaKnown RBP13.76□□□□□ -0.21
XRCC1-201ENST00000262887 GPR31O00270 319 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 ST8SIA5O15466 376 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 EGFP01133 1207 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 IFNA4P05014 189 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 PVALBP20472 110 aaPredicted RBP13.76□□□□□ -0.21
XRCC1-201ENST00000262887 CERS1P27544 350 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 NDUFS1P28331 727 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 PSMB10P40306 273 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 METAP1P53582 386 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 ILF3Q12906 894 aaKnown RBP eCLIP13.76□□□□□ -0.21
XRCC1-201ENST00000262887 OR1Q1Q15612 314 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 STPG1Q5TH74 334 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 FAM111BQ6SJ93 734 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 OR51L1Q8NGJ5 315 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 OR6S1Q8NH40 331 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 MENTQ9BUN1 341 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 CES1P1Q9UKY3 287 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.76□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF780BQ9Y6R6 833 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 MDC1Q14676 2089 aaKnown RBP13.76□□□□□ -0.21
XRCC1-201ENST00000262887 TCF20Q9UGU0 1960 aaKnown RBP13.76□□□□□ -0.21
XRCC1-201ENST00000262887 MANSC4A6NHS7 340 aaPredicted RBP13.76□□□□□ -0.21
XRCC1-201ENST00000262887 ADH7P40394 386 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 PRKCZQ05513 592 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 PCGF3Q3KNV8 242 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 C5orf46Q6UWT4 87 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 ZNF546Q86UE3 836 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 LINC01555Q8NAE3 123 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 MS4A6EQ96DS6 147 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 SLC23A2Q9UGH3 650 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 MED31Q9Y3C7 131 aa13.76□□□□□ -0.21
XRCC1-201ENST00000262887 TBC1D3EA0A087X179 549 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 IGKV1-8A0A0C4DH67 115 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 TMEM272A0A1B0GTI8 110 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 RAB19A4D1S5 217 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 EIF1BO60739 113 aaKnown RBP13.75□□□□□ -0.21
XRCC1-201ENST00000262887 CD1AP06126 327 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 GP1BAP07359 652 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 OR2T7P0C7T2 308 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 EIF1P41567 113 aaKnown RBP13.75□□□□□ -0.21
XRCC1-201ENST00000262887 EEF1A1P68104 462 aaKnown RBP13.75□□□□□ -0.21
XRCC1-201ENST00000262887 MRM1Q6IN84 353 aaKnown RBP13.75□□□□□ -0.21
XRCC1-201ENST00000262887 TMPRSS11FQ6ZWK6 438 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 JAZF1Q86VZ6 243 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 LDLRAD3Q86YD5 345 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 GLB1L2Q8IW92 636 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 PUSL1Q8N0Z8 303 aaKnown RBP13.75□□□□□ -0.21
XRCC1-201ENST00000262887 SVBPQ8N300 66 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 OR2T27Q8NH04 317 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 ASB13Q8WXK3 278 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 LRIG1Q96JA1 1093 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 ARL5BQ96KC2 179 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 CNN2Q99439 309 aaKnown RBP13.75□□□□□ -0.21
XRCC1-201ENST00000262887 PIGMQ9H3S5 423 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 PRDM7Q9NQW5 492 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 PLEKHM1Q9Y4G2 1056 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 A0A0D9SG52 128 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 ABHD14A-ACY1A0A1B0GW23 586 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 VEGFDO43915 354 aa13.75□□□□□ -0.21
XRCC1-201ENST00000262887 RBBP9O75884 186 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms