RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 MMP17Q9ULZ9 603 aa20.74■□□□□ 0.91
MCF2L-201ENST00000261963 FAM86C2PA6NEL3 165 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 TGFBR3LH3BV60 316 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 ZNF593O00488 134 aaPredicted RBP20.73■□□□□ 0.91
MCF2L-201ENST00000261963 FZD7O75084 574 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 NGFRP08138 427 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 ACAA2P42765 397 aaKnown RBP20.73■□□□□ 0.91
MCF2L-201ENST00000261963 RNASE12Q5GAN4 147 aaKnown RBP20.73■□□□□ 0.91
MCF2L-201ENST00000261963 TCTE1Q5JU00 501 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 LRFN4Q6PJG9 635 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 ZNF614Q8N883 585 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 ZNF527Q8NB42 609 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 MOSPD2Q8NHP6 518 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 YIPF5Q969M3 257 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 TEAD3Q99594 435 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 PELOQ9BRX2 385 aaKnown RBP20.73■□□□□ 0.91
MCF2L-201ENST00000261963 BEX1Q9HBH7 125 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 PCDHB16Q9NRJ7 776 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 DNAJB12Q9NXW2 375 aaKnown RBP20.73■□□□□ 0.91
MCF2L-201ENST00000261963 ZMAT5Q9UDW3 170 aaKnown RBP20.73■□□□□ 0.91
MCF2L-201ENST00000261963 OR5K4A6NMS3 321 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 PRR23D1E9PI22 279 aaPredicted RBP20.73■□□□□ 0.91
MCF2L-201ENST00000261963 OR10H2O60403 315 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 PRR23D2P0DMB1 279 aaPredicted RBP20.73■□□□□ 0.91
MCF2L-201ENST00000261963 CLUP10909 449 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 LTBRP36941 435 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 C1orf61Q13536 156 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 FHL1Q13642 323 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 RAB30Q15771 203 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 OOSP2Q86WS3 158 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 OR10H4Q8NGA5 316 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 DDOQ99489 341 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 ZNF426Q9BUY5 554 aa20.73■□□□□ 0.91
MCF2L-201ENST00000261963 SPTY2D1-AS1A0A0U1RR47 76 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 DAPL1A0PJW8 107 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 SYNDIG1LA6NDD5 238 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 SHISA7A6NL88 538 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 HRKO00198 91 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 HPXP02790 462 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 RAB3AP20336 220 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 SLC2A5P22732 501 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 FZD2Q14332 565 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 C7orf50Q9BRJ6 194 aaKnown RBP20.72■□□□□ 0.91
MCF2L-201ENST00000261963 LMF2Q9BU23 707 aaKnown RBP20.72■□□□□ 0.91
MCF2L-201ENST00000261963 OR51V1Q9H2C8 321 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 SEMA6CQ9H3T2 930 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 C8orf33Q9H7E9 229 aaPredicted RBP20.72■□□□□ 0.91
MCF2L-201ENST00000261963 EMC3Q9P0I2 261 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 FBXL4Q9UKA2 621 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 SLC35A3Q9Y2D2 325 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 SLC22A31A6NKX4 558 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 E9PI62 339 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 CBX5P45973 191 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 HHEXQ03014 270 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 SFXN4Q6P4A7 337 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 CMIPQ8IY22 773 aa20.72■□□□□ 0.91
MCF2L-201ENST00000261963 TRMT10AQ8TBZ6 339 aaKnown RBP20.72■□□□□ 0.91
MCF2L-201ENST00000261963 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.71■□□□□ 0.91
MCF2L-201ENST00000261963 L7N2F9 121 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 RGS11O94810 467 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 PPP1R3DO95685 299 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 MT-ND4P03905 459 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 ALDOBP05062 364 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 MRPL3P09001 348 aaKnown RBP20.71■□□□□ 0.91
MCF2L-201ENST00000261963 RPS7P62081 194 aaKnown RBP20.71■□□□□ 0.91
MCF2L-201ENST00000261963 CRMP1Q14194 572 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 CYB561A3Q8NBI2 242 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 TNFRSF13CQ96RJ3 184 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 ZMIZ1Q9ULJ6 1067 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 DTX4Q9Y2E6 619 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 SLCO1B1Q9Y6L6 691 aa20.71■□□□□ 0.91
MCF2L-201ENST00000261963 LGALS8O00214 317 aa20.7■□□□□ 0.91
MCF2L-201ENST00000261963 FCER2P06734 321 aa20.7■□□□□ 0.91
MCF2L-201ENST00000261963 NMBP08949 121 aa20.7■□□□□ 0.91
MCF2L-201ENST00000261963 SDHBP21912 280 aa20.7■□□□□ 0.91
MCF2L-201ENST00000261963 SHC1P29353 583 aa20.7■□□□□ 0.91
MCF2L-201ENST00000261963 CCINQ13939 588 aa20.7■□□□□ 0.91
MCF2L-201ENST00000261963 AVL9Q8NBF6 648 aa20.7■□□□□ 0.91
MCF2L-201ENST00000261963 SMAP2Q8WU79 429 aaPredicted RBP20.7■□□□□ 0.91
MCF2L-201ENST00000261963 ADGRL4Q9HBW9 690 aa20.7■□□□□ 0.91
MCF2L-201ENST00000261963 A0A0A6YYC8 382 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-201ENST00000261963 I3L1I5 382 aaPredicted RBP20.7■□□□□ 0.9
MCF2L-201ENST00000261963 NAT2P11245 290 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 SLC16A1P53985 500 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 PITPNAQ00169 270 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 SNTB2Q13425 540 aaKnown RBP20.7■□□□□ 0.9
MCF2L-201ENST00000261963 FAM53BQ14153 422 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 SLC22A10Q63ZE4 541 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 OR5W2Q8NH69 310 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 ELMOD3Q96FG2 381 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 AHCYL2Q96HN2 611 aaKnown RBP20.7■□□□□ 0.9
MCF2L-201ENST00000261963 VSTM2LQ96N03 204 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 CHIAQ9BZP6 476 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 TRIM36Q9NQ86 728 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 INPP5EQ9NRR6 644 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 RPS6KB2Q9UBS0 482 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 GON4LQ3T8J9 2241 aa20.7■□□□□ 0.9
MCF2L-201ENST00000261963 RIIAD1A6NNX1 92 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 SBK2P0C263 348 aa20.69■□□□□ 0.9
MCF2L-201ENST00000261963 THEGLP0DJG4 465 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms