RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 OR13C9Q8NGT0 318 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 MUCL1Q96DR8 90 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF286AQ9HBT8 521 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 MARCH5Q9NX47 278 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 TMED7-TICAM2A0A0A6YYA0 188 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 IGHV3-20A0A0C4DH32 117 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 GAPDHSO14556 408 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 FZD7O75084 574 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 MED6O75586 246 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 OMGP23515 440 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 PRKAR1BP31321 381 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 NPSR1Q6W5P4 371 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 PRICKLE2Q7Z3G6 844 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF740Q8NDX6 193 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF582Q96NG8 517 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 CXorf36Q9H7Y0 433 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 SLAMF7Q9NQ25 335 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 TMED7Q9Y3B3 224 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 A0A1B0GVG6 124 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 D6RAR5 112 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 GALR3O60755 368 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 PRAF2O60831 178 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 FBXO24O75426 580 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 SEC14L2O76054 403 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 OR7C1O76099 320 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 GLSO94925 669 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 RPA2P15927 270 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 GABRB3P28472 473 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 HOXA9P31269 272 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 TM4SF4P48230 202 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 CCSMST1Q4G0I0 132 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 LSMEM2Q8N112 164 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 SLC39A13Q96H72 371 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 GAREM1Q9H706 876 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 PRMT8Q9NR22 394 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 INPP5EQ9NRR6 644 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 MYH15Q9Y2K3 1946 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 TNFRSF10AO00220 468 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 GFRA2O00451 464 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 MAKP20794 623 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 BCL6P41182 706 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 TSFMP43897 325 aaKnown RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 REEP5Q00765 189 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 TSPAN31Q12999 210 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF836Q6ZNA1 936 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 RPL3LQ92901 407 aaKnown RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 NAT6Q93015 286 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 SAT2Q96F10 170 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 ZC3HAV1LQ96H79 300 aaKnown RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 ALG12Q9BV10 488 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 RNF32Q9H0A6 362 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 CTDSP2O14595 271 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 CACNG3O60359 315 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 NUDT1P36639 197 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 DCAF7P61962 342 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 CST9LP1Q5W188 147 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF767PQ75MW2 155 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 KIAA0907Q7Z7F0 614 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 ELP4Q96EB1 424 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 ACSS1Q9NUB1 689 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 COPS3Q9UNS2 423 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 WIF1Q9Y5W5 379 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 ANKRD36CQ5JPF3 1778 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 HSBP1L1C9JCN9 74 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 SLC34A2O95436 690 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 RBPJQ06330 500 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 PKDCCQ504Y2 493 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 RPL22L1Q6P5R6 122 aaKnown RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 LRRC28Q86X40 367 aaPredicted RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 UTP4Q969X6 686 aaKnown RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 TM4SF18Q96CE8 201 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 HRASLSQ9HDD0 168 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 KCNJ16Q9NPI9 418 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 NME7Q9Y5B8 376 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 TAPBPO15533 448 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 PKLRP30613 574 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 OR8B8Q15620 311 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 CMPK2Q5EBM0 449 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 GAREM2Q75VX8 874 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 LGALS14Q8TCE9 139 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 PDLIM5Q96HC4 596 aaKnown RBP11.22□□□□□ -0.61
COL8A1-201ENST00000261037 MRI1Q9BV20 369 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 NOX4Q9NPH5 578 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 BIN3Q9NQY0 253 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 C1GALT1Q9NS00 363 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 EMC9Q9Y3B6 208 aa11.22□□□□□ -0.61
COL8A1-201ENST00000261037 A0A0B4J2A0 478 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 PTHP01270 115 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 FURINP09958 794 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 DUSP7Q16829 419 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 SLC36A2Q495M3 483 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 MBOAT2Q6ZWT7 520 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 LAX1Q8IWV1 398 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 AGBL5Q8NDL9 886 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 WFDC5Q8TCV5 224 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 HAVCR2Q8TDQ0 301 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 H1FXQ92522 213 aaKnown RBP11.21□□□□□ -0.61
COL8A1-201ENST00000261037 SELENOIQ9C0D9 397 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 SHPKQ9UHJ6 478 aa11.21□□□□□ -0.61
COL8A1-201ENST00000261037 ATG4BQ9Y4P1 393 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms