RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 BABAM2Q9NXR7 383 aa7□□□□□ -1.29
RIF1-201ENST00000243326 NXT1Q9UKK6 140 aaKnown RBP7□□□□□ -1.29
RIF1-201ENST00000243326 SCG5P05408 212 aa7□□□□□ -1.29
RIF1-201ENST00000243326 RBMS1P29558 406 aaKnown RBP7□□□□□ -1.29
RIF1-201ENST00000243326 TLE3Q04726 772 aa7□□□□□ -1.29
RIF1-201ENST00000243326 CAMK2DQ13557 499 aa7□□□□□ -1.29
RIF1-201ENST00000243326 DEFB133Q30KQ1 61 aa7□□□□□ -1.29
RIF1-201ENST00000243326 PLCXD3Q63HM9 321 aa7□□□□□ -1.29
RIF1-201ENST00000243326 OR10K2Q6IF99 312 aa7□□□□□ -1.29
RIF1-201ENST00000243326 MOB3CQ70IA8 216 aa7□□□□□ -1.29
RIF1-201ENST00000243326 ACOT4Q8N9L9 421 aa7□□□□□ -1.29
RIF1-201ENST00000243326 SLC7A6Q92536 515 aa7□□□□□ -1.29
RIF1-201ENST00000243326 MIB2Q96AX9 1013 aa7□□□□□ -1.29
RIF1-201ENST00000243326 MS4A4AQ96JQ5 239 aa7□□□□□ -1.29
RIF1-201ENST00000243326 UQCC2Q9BRT2 126 aa7□□□□□ -1.29
RIF1-201ENST00000243326 ZNF160Q9HCG1 818 aa7□□□□□ -1.29
RIF1-201ENST00000243326 SNAPINO95295 136 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 NSA2O95478 260 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 MMP2P08253 660 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ELAVL4P26378 380 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 AOAHP28039 575 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 NXNL2Q5VZ03 156 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 LYPD8Q6UX82 237 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TMEM151BQ8IW70 566 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SULF2Q8IWU5 870 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 FAM185AQ8N0U4 392 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SLC2A12Q8TD20 617 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 DCLRE1CQ96SD1 692 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 ISG20L2Q9H9L3 353 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 LANCL2Q9NS86 450 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 KIF13AQ9H1H9 1805 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 C17orf105B2RV13 164 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 NR2C1P13056 603 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ZNF44P15621 663 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 UBE2IP63279 158 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 CRMP1Q14194 572 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 IGSF11Q5DX21 431 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ZNF687Q8N1G0 1237 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 RTP4Q96DX8 246 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 KCNK15Q9H427 330 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ACSS1Q9NUB1 689 aaPredicted RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 POM121BA6NF01 834 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TGM6O95932 706 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 NSDHLQ15738 373 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SHEQ5VZ18 495 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ZNF776Q68DI1 518 aaPredicted RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 HIST2H3AQ71DI3 136 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TP53I13Q8NBR0 393 aaPredicted RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 PELOQ9BRX2 385 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 GON7Q9BXV9 100 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 B3GNT2Q9NY97 397 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 DOT1LQ8TEK3 1739 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 P2RY2P41231 377 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 OR1D4P47884 311 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 OGFOD3Q6PK18 319 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 CORO6Q6QEF8 472 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 Q6ZSR9 355 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 PAQR9Q6ZVX9 377 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ERN2Q76MJ5 926 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 LRIG1Q96JA1 1093 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SFXN2Q96NB2 322 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 CTNSO60931 367 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 GUCA2AQ02747 115 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 EXOSC2Q13868 293 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 C2orf76Q3KRA6 126 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TRAM1L1Q8N609 369 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 POM121Q96HA1 1249 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SLC12A9Q9BXP2 914 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 OR14J1Q9UGF5 321 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 FBXO7Q9Y3I1 522 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ZNF175Q9Y473 711 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 GNRH1P01148 92 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 CD79AP11912 226 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ZNF30P17039 623 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 RPS27AP62979 156 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 UBA52P62987 128 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 BAMBIQ13145 260 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SLC25A35Q3KQZ1 300 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 UNC5DQ6UXZ4 953 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 OR2T4Q8NH00 348 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TRMT2BQ96GJ1 504 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 TMEM68Q96MH6 324 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SELENOIQ9C0D9 397 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 OSGIN2Q9Y236 505 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SULT1C2O00338 296 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TUSC2O75896 110 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TBCEQ15813 527 aaPredicted RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 OR2B11Q5JQS5 317 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TOR2AQ5JU69 321 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 SSX9Q7RTT3 188 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 C15orf40Q8WUR7 153 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 FGGYQ96C11 551 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 TVP23CQ96ET8 276 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 URM1Q9BTM9 101 aaKnown RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 LIN7BQ9HAP6 207 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 PLEKHB1Q9UF11 243 aaPredicted RBP6.99□□□□□ -1.29
RIF1-201ENST00000243326 NTN1O95631 604 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 PLA2G7Q13093 441 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 ABI3BPQ7Z7G0 1075 aa6.99□□□□□ -1.29
RIF1-201ENST00000243326 CLEC14AQ86T13 490 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms